Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AP001858.2-201ENST00000536213 601 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC010998.3-201ENST00000613871 631 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AL138693.1-201ENST00000622219 129 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC116667.2-201ENST00000641075 823 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AP004289.1-201ENST00000436307 2205 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 CASC19-246ENST00000641625 1606 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC073365.1-203ENST00000641055 1992 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RPL11P4-201ENST00000332269 436 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 SNORA43.1-201ENST00000364863 140 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RNA5SP485-201ENST00000365053 119 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RPL23AP18-201ENST00000416139 468 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AL354707.3-201ENST00000427308 331 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 GAPDHP19-201ENST00000431768 1005 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC064862.5-201ENST00000440618 334 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC079922.1-201ENST00000443291 359 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 OR7L1P-201ENST00000456181 380 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RBMY2HP-201ENST00000457961 720 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC018635.1-201ENST00000468292 1030 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 SLC25A51P1-201ENST00000468432 871 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC093816.1-201ENST00000515076 913 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 OR4A46P-201ENST00000527255 933 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC092865.1-201ENST00000544395 1023 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AL158211.1-201ENST00000566763 763 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RN7SL66P-201ENST00000582099 264 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC092474.3-201ENST00000603022 568 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC012368.3-201ENST00000604190 219 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 MIR6823-201ENST00000622118 61 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AL121768.1-201ENST00000613917 2544 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 AC092724.1-201ENST00000624623 3397 ntBASIC6.17□□□□□ -1.42
ZNF549Q6P9A3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms