Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC009500.1-201ENST00000420684 583 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 USP9YP14-201ENST00000430663 563 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AL691517.1-201ENST00000440833 1235 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 RRM2P4-201ENST00000441721 562 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 PFN1P11-201ENST00000445829 389 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 UBBP5-201ENST00000446970 266 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 RPL23AP28-201ENST00000448062 470 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC009963.4-201ENST00000448535 339 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 MEF2AP1-201ENST00000454867 863 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC108729.2-201ENST00000476543 840 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 HMGN1P16-201ENST00000508308 283 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AL390198.2-201ENST00000510553 222 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC140063.1-201ENST00000541343 259 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC006512.2-201ENST00000543250 486 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 FXNP1-201ENST00000555153 337 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 ZNF971P-201ENST00000562068 1249 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC233266.2-201ENST00000567067 528 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC068790.2-201ENST00000602601 557 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AC020765.1-201ENST00000604296 328 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AL049840.6-201ENST00000604583 345 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.8□□□□□ -1.32
USP39Q53GS9 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AL162233.1-201ENST00000620014 944 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC020763.5-201ENST00000623298 430 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 AP002967.1-201ENST00000624203 539 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 AC099654.8-201ENST00000637757 681 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.8□□□□□ -1.32
USP39Q53GS9 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USP39Q53GS9 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.8□□□□□ -1.32
USP39Q53GS9 DDX43P1-201ENST00000510713 1763 ntBASIC6.8□□□□□ -1.32
USP39Q53GS9 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
USP39Q53GS9 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
USP39Q53GS9 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.79□□□□□ -1.32
USP39Q53GS9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USP39Q53GS9 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.79□□□□□ -1.32
USP39Q53GS9 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.79□□□□□ -1.32
USP39Q53GS9 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.79□□□□□ -1.32
USP39Q53GS9 IFIT1P1-201ENST00000400497 1449 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USP39Q53GS9 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USP39Q53GS9 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USP39Q53GS9 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USP39Q53GS9 SNORA63.3-201ENST00000362682 132 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 SNORD116-2-201ENST00000384274 95 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 SNORD116-6-201ENST00000384711 96 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 RPL12P23-201ENST00000405880 490 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 CYCSP17-201ENST00000407870 315 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 MTCO2P8-201ENST00000412213 658 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 RANP6-201ENST00000413691 644 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USP39Q53GS9 AC115283.1-201ENST00000427353 400 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.79□□□□□ -1.32
USP39Q53GS9 VN1R108P-201ENST00000431580 830 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.79□□□□□ -1.32
USP39Q53GS9 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.79□□□□□ -1.32
USP39Q53GS9 ARMC4P1-201ENST00000438905 707 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 EIF5AP4-201ENST00000441206 465 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.79□□□□□ -1.32
USP39Q53GS9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.79□□□□□ -1.32
USP39Q53GS9 POU5F1P5-201ENST00000445059 658 ntBASIC6.79□□□□□ -1.32
USP39Q53GS9 MTND1P33-201ENST00000446251 917 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms