Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC091492.1-201ENST00000419844 272 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 CYCSP52-201ENST00000422857 310 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AJ239321.1-201ENST00000424255 564 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN1BQ07699 Z84478.1-201ENST00000438230 1219 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN1BQ07699 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN1BQ07699 Z83838.1-202ENST00000456225 839 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 RN7SL654P-201ENST00000479178 292 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.68□□□□□ -1.5
SCN1BQ07699 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC091965.3-201ENST00000506236 208 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 SEC11B-201ENST00000518383 499 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN1BQ07699 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN1BQ07699 RN7SL689P-201ENST00000577215 297 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC011921.2-201ENST00000589465 152 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AL157899.1-201ENST00000604110 936 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC079791.1-201ENST00000605356 973 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AL592494.3-201ENST00000609485 464 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC024255.1-201ENST00000614376 102 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 RNA5SP439-201ENST00000617595 124 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC069234.4-201ENST00000621276 412 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC005753.1-201ENST00000623837 618 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SCN1BQ07699 AC093671.1-201ENST00000624981 2929 ntBASIC5.68□□□□□ -1.5
SCN1BQ07699 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SCN1BQ07699 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN1BQ07699 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN1BQ07699 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCN1BQ07699 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.68□□□□□ -1.5
SCN1BQ07699 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SCN1BQ07699 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCN1BQ07699 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 TRIM53CP-201ENST00000531490 1354 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN1BQ07699 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC022164.1-201ENST00000568767 2673 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SCN1BQ07699 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN1BQ07699 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL136100.1-201ENST00000407696 330 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN1BQ07699 SNORA11D-201ENST00000408548 128 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 SNORA11E-201ENST00000408778 128 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC007064.3-201ENST00000422608 359 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC009362.1-201ENST00000427253 406 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC114402.2-201ENST00000432760 643 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AL590128.1-201ENST00000433407 286 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL354714.5-201ENST00000450131 590 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC079193.1-201ENST00000460497 588 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC012123.2-201ENST00000485809 248 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 IGKV1D-32-201ENST00000517449 318 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC009879.1-201ENST00000520029 839 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC136777.2-201ENST00000522979 358 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 HNRNPCP8-201ENST00000528764 888 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCN1BQ07699 MIR4800-201ENST00000537353 80 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AC140063.1-201ENST00000541343 259 ntBASIC5.67□□□□□ -1.5
SCN1BQ07699 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.67□□□□□ -1.5
SCN1BQ07699 AL132640.1-201ENST00000559594 619 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms