Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR138-2-201ENST00000384916 84 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AL391419.1-201ENST00000398901 1275 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 FDPSP5-201ENST00000399474 1057 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AKR1D1P1-201ENST00000457236 936 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AL355032.1-201ENST00000472981 438 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC005519.1-201ENST00000554490 601 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC100832.2-201ENST00000582080 776 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HIST1H1AQ02539 AP005432.1-201ENST00000580891 3485 ntBASIC4.8□□□□□ -1.64
HIST1H1AQ02539 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC007842.1-201ENST00000597336 2039 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC074375.1-201ENST00000372993 192 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 SNORA7A-201ENST00000384765 139 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 CDC42P6-201ENST00000421246 576 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AL590399.2-201ENST00000427536 309 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC092106.2-201ENST00000436597 487 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC083855.1-201ENST00000440041 258 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AL161722.1-201ENST00000446972 1032 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 RN7SL372P-201ENST00000461982 298 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 RN7SL350P-201ENST00000492591 299 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 COX6B1P4-201ENST00000519826 484 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC009120.3-201ENST00000563335 499 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC090651.1-201ENST00000567865 634 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC068408.1-201ENST00000577406 1144 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 MIR378H-201ENST00000579966 83 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AL512430.4-201ENST00000603085 613 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC027506.1-201ENST00000621395 198 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC116667.2-201ENST00000641075 823 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC005005.4-201ENST00000623789 16698 ntBASIC4.79□□□□□ -1.64
HIST1H1AQ02539 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms