Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CLCA3P-203ENST00000490028 2781 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNA1P78396 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.12□□□□□ -1.27
CCNA1P78396 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNA1P78396 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNA1P78396 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNA1P78396 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNA1P78396 AL355355.1-201ENST00000442900 793 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 FTLP8-201ENST00000446770 267 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 RANP2-201ENST00000456833 229 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 RN7SL193P-201ENST00000491708 276 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 SNORA58-201ENST00000505219 137 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 SETP21-201ENST00000514799 892 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.12□□□□□ -1.27
CCNA1P78396 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNA1P78396 AP005119.1-201ENST00000580956 292 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 AC005244.1-201ENST00000582566 339 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 AC008555.7-201ENST00000605008 583 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 MAPK10-365ENST00000641902 3825 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.12□□□□□ -1.27
CCNA1P78396 AC022819.1-201ENST00000563495 3910 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNA1P78396 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNA1P78396 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CCNA1P78396 RNF19BPY-201ENST00000458209 1550 ntBASIC7.12□□□□□ -1.27
CCNA1P78396 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNA1P78396 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 AC005332.9-201ENST00000620266 2921 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 CUBNP3-201ENST00000457461 1784 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNA1P78396 AC245884.2-201ENST00000426257 404 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNA1P78396 VN1R110P-201ENST00000438988 971 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNA1P78396 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNA1P78396 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 HMGN1P36-201ENST00000446623 298 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 AP006222.1-205ENST00000450734 457 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 AL445665.1-202ENST00000452436 324 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNA1P78396 AC115223.1-201ENST00000466377 870 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 RN7SL717P-201ENST00000478343 297 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.11□□□□□ -1.27
CCNA1P78396 WBP1LP3-201ENST00000523033 208 ntBASIC7.11□□□□□ -1.27
CCNA1P78396 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNA1P78396 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.11□□□□□ -1.27
CCNA1P78396 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNA1P78396 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.11□□□□□ -1.27
CCNA1P78396 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNA1P78396 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNA1P78396 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNA1P78396 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNA1P78396 AC022325.1-201ENST00000502748 2199 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 RARSP1-201ENST00000542842 1418 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNA1P78396 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNA1P78396 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 AC011416.1-201ENST00000514947 1732 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 AC092821.2-201ENST00000545710 2042 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 AC009120.2-204ENST00000621548 2032 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNA1P78396 AL136531.3-201ENST00000624378 3658 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
CCNA1P78396 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNA1P78396 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNA1P78396 RN7SKP292-201ENST00000365522 317 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
CCNA1P78396 MIR1203-201ENST00000408812 85 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 SDHDP6-201ENST00000414693 480 ntBASIC7.1□□□□□ -1.27
CCNA1P78396 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms