Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH11P55287 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 AL645939.3-201ENST00000435408 225 ntBASIC5.8□□□□□ -1.48
CDH11P55287 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 AC128677.1-201ENST00000436016 442 ntBASIC5.8□□□□□ -1.48
CDH11P55287 AC092106.2-201ENST00000436597 487 ntBASIC5.8□□□□□ -1.48
CDH11P55287 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH11P55287 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH11P55287 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH11P55287 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 AC116917.1-201ENST00000520558 305 ntBASIC5.8□□□□□ -1.48
CDH11P55287 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDH11P55287 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 AC234775.3-201ENST00000564612 656 ntBASIC5.8□□□□□ -1.48
CDH11P55287 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH11P55287 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 AL133406.3-201ENST00000606817 541 ntBASIC5.8□□□□□ -1.48
CDH11P55287 AC100814.1-201ENST00000606963 623 ntBASIC5.8□□□□□ -1.48
CDH11P55287 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 AC061999.1-201ENST00000624454 177 ntBASIC5.8□□□□□ -1.48
CDH11P55287 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH11P55287 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH11P55287 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH11P55287 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH11P55287 AC090181.3-201ENST00000624777 1514 ntBASIC5.79□□□□□ -1.48
CDH11P55287 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
CDH11P55287 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH11P55287 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH11P55287 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 BX284613.1-201ENST00000452221 1641 ntBASIC5.79□□□□□ -1.48
CDH11P55287 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 RNA5SP140-201ENST00000364524 92 ntBASIC5.79□□□□□ -1.48
CDH11P55287 RNU1-59P-201ENST00000364829 162 ntBASIC5.79□□□□□ -1.48
CDH11P55287 RNA5SP85-201ENST00000365378 119 ntBASIC5.79□□□□□ -1.48
CDH11P55287 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH11P55287 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH11P55287 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH11P55287 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH11P55287 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 RPL23AP85-201ENST00000421838 433 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC006455.6-201ENST00000426192 893 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC097523.2-201ENST00000435551 652 ntBASIC5.79□□□□□ -1.48
CDH11P55287 LINC00328-2P-201ENST00000436585 219 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH11P55287 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC079922.1-201ENST00000443291 359 ntBASIC5.79□□□□□ -1.48
CDH11P55287 UBBP5-201ENST00000446970 266 ntBASIC5.79□□□□□ -1.48
CDH11P55287 OR52E7P-201ENST00000452394 933 ntBASIC5.79□□□□□ -1.48
CDH11P55287 SLC25A51P1-201ENST00000468432 871 ntBASIC5.79□□□□□ -1.48
CDH11P55287 RN7SL413P-201ENST00000482700 297 ntBASIC5.79□□□□□ -1.48
CDH11P55287 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH11P55287 OR52A4P-203ENST00000498233 1014 ntBASIC5.79□□□□□ -1.48
CDH11P55287 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH11P55287 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 IGKV1D-22-201ENST00000518953 324 ntBASIC5.79□□□□□ -1.48
CDH11P55287 OR4A40P-201ENST00000533878 948 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC023310.2-201ENST00000553844 547 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC025283.1-201ENST00000572039 734 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AC091133.5-201ENST00000603088 301 ntBASIC5.79□□□□□ -1.48
CDH11P55287 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH11P55287 AC093635.1-201ENST00000609028 555 ntBASIC5.79□□□□□ -1.48
CDH11P55287 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH11P55287 AC068726.1-201ENST00000610993 341 ntBASIC5.79□□□□□ -1.48
CDH11P55287 U1.25-201ENST00000614085 162 ntBASIC5.79□□□□□ -1.48
CDH11P55287 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms