Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 U1.34-201ENST00000618578 162 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 U1.31-201ENST00000620022 160 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 AC096921.2-201ENST00000561507 1916 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
LIMK2P53671 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK2P53671 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.3□□□□□ -1.4
LIMK2P53671 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK2P53671 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 RPL11P4-201ENST00000332269 436 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 PSMD10P2-201ENST00000432890 672 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 OR2L9P-201ENST00000444456 913 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 RPL7L1P3-201ENST00000455249 689 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 AL355032.1-201ENST00000472981 438 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK2P53671 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 RPA2P3-201ENST00000533268 770 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.29□□□□□ -1.4
LIMK2P53671 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.29□□□□□ -1.4
LIMK2P53671 NDUFA5P11-201ENST00000567995 343 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 AC027229.1-201ENST00000583887 253 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 MIR7159-201ENST00000620587 66 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.29□□□□□ -1.4
LIMK2P53671 AC116667.2-201ENST00000641075 823 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 IMMTP1-201ENST00000435590 2219 ntBASIC6.29□□□□□ -1.4
LIMK2P53671 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
LIMK2P53671 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK2P53671 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
LIMK2P53671 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 CCNT2P1-201ENST00000423082 1315 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
LIMK2P53671 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 AL136984.1-201ENST00000607611 1893 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LIMK2P53671 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LIMK2P53671 AC079753.1-201ENST00000623243 3868 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
LIMK2P53671 IFIT1P1-201ENST00000400497 1449 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK2P53671 AL445238.1-204ENST00000400311 463 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 RPL21P50-201ENST00000417698 477 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AC015977.1-201ENST00000418887 292 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AC108479.1-201ENST00000431142 427 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 RPS10P18-201ENST00000442662 495 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.28□□□□□ -1.4
LIMK2P53671 AC090142.2-201ENST00000483263 416 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK2P53671 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK2P53671 AC010343.2-201ENST00000510162 224 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 RN7SKP67-201ENST00000515905 235 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK2P53671 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK2P53671 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK2P53671 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.28□□□□□ -1.4
LIMK2P53671 MIR4502-201ENST00000580432 81 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 RN7SL475P-201ENST00000583379 298 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK2P53671 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.28□□□□□ -1.4
LIMK2P53671 AC079315.1-201ENST00000602952 623 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AL139041.1-201ENST00000605480 610 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AC006924.1-201ENST00000610750 559 ntBASIC6.28□□□□□ -1.4
LIMK2P53671 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK2P53671 AC003992.1-201ENST00000635364 557 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms