Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.75□□□□□ -1.33
COPAP53621 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 RNU6-670P-201ENST00000364312 104 ntBASIC6.75□□□□□ -1.33
COPAP53621 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 MIR1275-201ENST00000408770 80 ntBASIC6.75□□□□□ -1.33
COPAP53621 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.75□□□□□ -1.33
COPAP53621 GPN3P1-201ENST00000423883 535 ntBASIC6.75□□□□□ -1.33
COPAP53621 AL139158.1-201ENST00000424719 340 ntBASIC6.75□□□□□ -1.33
COPAP53621 FAR1P1-201ENST00000427163 934 ntBASIC6.75□□□□□ -1.33
COPAP53621 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.75□□□□□ -1.33
COPAP53621 AL392003.1-201ENST00000434394 243 ntBASIC6.75□□□□□ -1.33
COPAP53621 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.75□□□□□ -1.33
COPAP53621 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.75□□□□□ -1.33
COPAP53621 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.75□□□□□ -1.33
COPAP53621 AC118758.1-202ENST00000454719 225 ntBASIC6.75□□□□□ -1.33
COPAP53621 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.75□□□□□ -1.33
COPAP53621 AC011352.2-201ENST00000514574 1016 ntBASIC6.75□□□□□ -1.33
COPAP53621 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.75□□□□□ -1.33
COPAP53621 BCAS2P1-201ENST00000528022 632 ntBASIC6.75□□□□□ -1.33
COPAP53621 AC124891.1-201ENST00000536322 519 ntBASIC6.75□□□□□ -1.33
COPAP53621 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.75□□□□□ -1.33
COPAP53621 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.75□□□□□ -1.33
COPAP53621 AC122134.1-202ENST00000569111 1201 ntBASIC6.75□□□□□ -1.33
COPAP53621 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.75□□□□□ -1.33
COPAP53621 AC105148.1-201ENST00000604961 409 ntBASIC6.75□□□□□ -1.33
COPAP53621 AP000240.1-201ENST00000609910 452 ntBASIC6.75□□□□□ -1.33
COPAP53621 MIR7854-201ENST00000620068 65 ntBASIC6.75□□□□□ -1.33
COPAP53621 SNX18P10-201ENST00000625014 519 ntBASIC6.75□□□□□ -1.33
COPAP53621 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 AC111152.1-202ENST00000635848 339 ntBASIC6.75□□□□□ -1.33
COPAP53621 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.75□□□□□ -1.33
COPAP53621 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 Z97989.1-201ENST00000531702 2421 ntBASIC6.75□□□□□ -1.33
COPAP53621 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.75□□□□□ -1.33
COPAP53621 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.75□□□□□ -1.33
COPAP53621 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 AC096992.2-201ENST00000609553 1684 ntBASIC6.74□□□□□ -1.33
COPAP53621 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 AC009120.2-204ENST00000621548 2032 ntBASIC6.74□□□□□ -1.33
COPAP53621 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 RNU1-65P-201ENST00000363919 148 ntBASIC6.74□□□□□ -1.33
COPAP53621 RNA5SP232-201ENST00000364144 119 ntBASIC6.74□□□□□ -1.33
COPAP53621 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.74□□□□□ -1.33
COPAP53621 AC239367.3-201ENST00000428996 814 ntBASIC6.74□□□□□ -1.33
COPAP53621 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.74□□□□□ -1.33
COPAP53621 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.74□□□□□ -1.33
COPAP53621 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.74□□□□□ -1.33
COPAP53621 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 AL161722.1-201ENST00000446972 1032 ntBASIC6.74□□□□□ -1.33
COPAP53621 CCNJP1-201ENST00000450600 1149 ntBASIC6.74□□□□□ -1.33
COPAP53621 CTSLP6-201ENST00000458273 1002 ntBASIC6.74□□□□□ -1.33
COPAP53621 RN7SL170P-201ENST00000487098 295 ntBASIC6.74□□□□□ -1.33
COPAP53621 H3F3AP3-201ENST00000497682 407 ntBASIC6.74□□□□□ -1.33
COPAP53621 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 MTND6P8-201ENST00000503471 522 ntBASIC6.74□□□□□ -1.33
COPAP53621 HMGN1P16-201ENST00000508308 283 ntBASIC6.74□□□□□ -1.33
COPAP53621 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.74□□□□□ -1.33
COPAP53621 AC019227.1-201ENST00000526902 510 ntBASIC6.74□□□□□ -1.33
COPAP53621 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.74□□□□□ -1.33
COPAP53621 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.74□□□□□ -1.33
COPAP53621 AC090888.3-201ENST00000558917 509 ntBASIC6.74□□□□□ -1.33
COPAP53621 FAM60CP-201ENST00000591086 664 ntBASIC6.74□□□□□ -1.33
COPAP53621 AL589765.6-201ENST00000601909 549 ntBASIC6.74□□□□□ -1.33
COPAP53621 RNU6-84P-201ENST00000607737 102 ntBASIC6.74□□□□□ -1.33
COPAP53621 AC009032.1-201ENST00000617574 431 ntBASIC6.74□□□□□ -1.33
COPAP53621 AL162377.2-201ENST00000624532 337 ntBASIC6.74□□□□□ -1.33
COPAP53621 AL121936.2-201ENST00000641935 662 ntBASIC6.74□□□□□ -1.33
COPAP53621 AP002370.1-201ENST00000528055 1602 ntBASIC6.74□□□□□ -1.33
COPAP53621 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 API5P1-201ENST00000424316 1510 ntBASIC6.74□□□□□ -1.33
COPAP53621 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.74□□□□□ -1.33
COPAP53621 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.74□□□□□ -1.33
COPAP53621 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPAP53621 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms