Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AKR1D1P1-201ENST00000457236 936 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AC004890.1-201ENST00000461005 181 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.8□□□□□ -1.32
NEK3P51956 RN7SL836P-201ENST00000476140 296 ntBASIC6.8□□□□□ -1.32
NEK3P51956 RN7SL382P-201ENST00000482631 282 ntBASIC6.8□□□□□ -1.32
NEK3P51956 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NEK3P51956 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.8□□□□□ -1.32
NEK3P51956 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.8□□□□□ -1.32
NEK3P51956 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NEK3P51956 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.8□□□□□ -1.32
NEK3P51956 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 AC130360.2-201ENST00000533477 1556 ntBASIC6.8□□□□□ -1.32
NEK3P51956 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
NEK3P51956 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.8□□□□□ -1.32
NEK3P51956 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.8□□□□□ -1.32
NEK3P51956 CTSLP2-201ENST00000580501 394 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 BMS1P7-201ENST00000602440 1052 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AC012175.1-201ENST00000603755 531 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AC092574.1-201ENST00000609771 420 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AC015819.1-201ENST00000613588 663 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.8□□□□□ -1.32
NEK3P51956 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NEK3P51956 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 Z97989.1-201ENST00000531702 2421 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AL512283.1-201ENST00000606756 1384 ntBASIC6.8□□□□□ -1.32
NEK3P51956 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.79□□□□□ -1.32
NEK3P51956 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.79□□□□□ -1.32
NEK3P51956 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.79□□□□□ -1.32
NEK3P51956 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 AC010401.2-201ENST00000575137 4934 ntBASIC6.79□□□□□ -1.32
NEK3P51956 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NEK3P51956 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.79□□□□□ -1.32
NEK3P51956 AC132825.1-201ENST00000463573 2247 ntBASIC6.79□□□□□ -1.32
NEK3P51956 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
NEK3P51956 STAG3L4-201ENST00000352103 530 ntBASIC6.79□□□□□ -1.32
NEK3P51956 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
NEK3P51956 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 AL663061.1-201ENST00000416625 580 ntBASIC6.79□□□□□ -1.32
NEK3P51956 SETP9-201ENST00000423837 832 ntBASIC6.79□□□□□ -1.32
NEK3P51956 MTND4P24-201ENST00000424002 397 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 AC023141.6-201ENST00000429418 337 ntBASIC6.79□□□□□ -1.32
NEK3P51956 GAPDHP19-201ENST00000431768 1005 ntBASIC6.79□□□□□ -1.32
NEK3P51956 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.79□□□□□ -1.32
NEK3P51956 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 MTND2P30-201ENST00000456663 382 ntBASIC6.79□□□□□ -1.32
NEK3P51956 RPL7AP23-201ENST00000482625 776 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AC093663.2-201ENST00000484625 313 ntBASIC6.79□□□□□ -1.32
NEK3P51956 OR9N1P-202ENST00000494289 481 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 OR9G2P-201ENST00000533326 880 ntBASIC6.79□□□□□ -1.32
NEK3P51956 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
NEK3P51956 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.79□□□□□ -1.32
NEK3P51956 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.79□□□□□ -1.32
NEK3P51956 AC020978.7-201ENST00000575953 1187 ntBASIC6.79□□□□□ -1.32
NEK3P51956 TMF1P1-201ENST00000576058 373 ntBASIC6.79□□□□□ -1.32
NEK3P51956 RN7SL199P-201ENST00000578752 281 ntBASIC6.79□□□□□ -1.32
NEK3P51956 RN7SL656P-201ENST00000579044 281 ntBASIC6.79□□□□□ -1.32
NEK3P51956 SNORD39.2-201ENST00000579995 76 ntBASIC6.79□□□□□ -1.32
NEK3P51956 RN7SL404P-201ENST00000582421 281 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.79□□□□□ -1.32
NEK3P51956 AC010333.3-201ENST00000615100 402 ntBASIC6.79□□□□□ -1.32
NEK3P51956 OR8G7P-201ENST00000616658 848 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AC061999.1-201ENST00000624454 177 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AC068213.1-201ENST00000625124 226 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.79□□□□□ -1.32
NEK3P51956 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NEK3P51956 AC007012.2-201ENST00000623206 1676 ntBASIC6.79□□□□□ -1.32
NEK3P51956 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NEK3P51956 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
NEK3P51956 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 CDC27P2-201ENST00000425026 1922 ntBASIC6.79□□□□□ -1.32
NEK3P51956 AC020658.2-201ENST00000559030 4020 ntBASIC6.79□□□□□ -1.32
NEK3P51956 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.79□□□□□ -1.32
NEK3P51956 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
NEK3P51956 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NEK3P51956 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms