Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCNAP12004 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCNAP12004 AC068870.3-201ENST00000625077 2536 ntBASIC6.23□□□□□ -1.41
PCNAP12004 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 RNU1-5P-201ENST00000362684 144 ntBASIC6.23□□□□□ -1.41
PCNAP12004 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 MTND2P12-201ENST00000417560 1252 ntBASIC6.23□□□□□ -1.41
PCNAP12004 RPL23AP85-201ENST00000421838 433 ntBASIC6.23□□□□□ -1.41
PCNAP12004 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 AC007568.1-201ENST00000422912 471 ntBASIC6.23□□□□□ -1.41
PCNAP12004 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 AL161722.1-201ENST00000446972 1032 ntBASIC6.23□□□□□ -1.41
PCNAP12004 REG1CP-206ENST00000447469 496 ntBASIC6.23□□□□□ -1.41
PCNAP12004 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.23□□□□□ -1.41
PCNAP12004 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.23□□□□□ -1.41
PCNAP12004 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 RN7SL790P-201ENST00000474043 298 ntBASIC6.23□□□□□ -1.41
PCNAP12004 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 RN7SKP5-201ENST00000517045 272 ntBASIC6.23□□□□□ -1.41
PCNAP12004 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCNAP12004 IGHV1-14-201ENST00000523391 241 ntBASIC6.23□□□□□ -1.41
PCNAP12004 AC131935.1-201ENST00000524621 333 ntBASIC6.23□□□□□ -1.41
PCNAP12004 CASP1P2-201ENST00000526830 1258 ntBASIC6.23□□□□□ -1.41
PCNAP12004 AP000619.2-201ENST00000546014 969 ntBASIC6.23□□□□□ -1.41
PCNAP12004 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCNAP12004 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.23□□□□□ -1.41
PCNAP12004 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.23□□□□□ -1.41
PCNAP12004 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.23□□□□□ -1.41
PCNAP12004 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.23□□□□□ -1.41
PCNAP12004 AC005229.3-201ENST00000603438 323 ntBASIC6.23□□□□□ -1.41
PCNAP12004 AC019257.2-201ENST00000605539 497 ntBASIC6.23□□□□□ -1.41
PCNAP12004 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.23□□□□□ -1.41
PCNAP12004 MIR6085-201ENST00000618314 110 ntBASIC6.23□□□□□ -1.41
PCNAP12004 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 SAGE3P-201ENST00000619800 1635 ntBASIC6.23□□□□□ -1.41
PCNAP12004 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCNAP12004 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCNAP12004 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.23□□□□□ -1.41
PCNAP12004 AC097063.1-201ENST00000426714 1797 ntBASIC6.23□□□□□ -1.41
PCNAP12004 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 FANCD2P2-201ENST00000437591 1400 ntBASIC6.23□□□□□ -1.41
PCNAP12004 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCNAP12004 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCNAP12004 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.23□□□□□ -1.41
PCNAP12004 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 AC015689.2-201ENST00000528172 1738 ntBASIC6.22□□□□□ -1.41
PCNAP12004 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PCNAP12004 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.22□□□□□ -1.41
PCNAP12004 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCNAP12004 RNA5SP350-201ENST00000363298 111 ntBASIC6.22□□□□□ -1.41
PCNAP12004 AC026310.1-201ENST00000396004 378 ntBASIC6.22□□□□□ -1.41
PCNAP12004 MIR1266-201ENST00000408125 84 ntBASIC6.22□□□□□ -1.41
PCNAP12004 RNA5SP115-201ENST00000411160 107 ntBASIC6.22□□□□□ -1.41
PCNAP12004 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.22□□□□□ -1.41
PCNAP12004 AC097721.1-201ENST00000427150 1253 ntBASIC6.22□□□□□ -1.41
PCNAP12004 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.22□□□□□ -1.41
PCNAP12004 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.22□□□□□ -1.41
PCNAP12004 NPM1P9-201ENST00000453156 844 ntBASIC6.22□□□□□ -1.41
PCNAP12004 RN7SL104P-201ENST00000498686 293 ntBASIC6.22□□□□□ -1.41
PCNAP12004 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.22□□□□□ -1.41
PCNAP12004 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.22□□□□□ -1.41
PCNAP12004 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.22□□□□□ -1.41
PCNAP12004 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.22□□□□□ -1.41
PCNAP12004 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.22□□□□□ -1.41
PCNAP12004 AC026956.1-201ENST00000558741 396 ntBASIC6.22□□□□□ -1.41
PCNAP12004 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.22□□□□□ -1.41
PCNAP12004 AC027796.1-201ENST00000575593 512 ntBASIC6.22□□□□□ -1.41
PCNAP12004 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.22□□□□□ -1.41
PCNAP12004 RPL7AP69-201ENST00000595306 806 ntBASIC6.22□□□□□ -1.41
PCNAP12004 AC036176.3-201ENST00000602456 418 ntBASIC6.22□□□□□ -1.41
PCNAP12004 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 AC117490.2-201ENST00000610042 594 ntBASIC6.22□□□□□ -1.41
PCNAP12004 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.22□□□□□ -1.41
PCNAP12004 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 CLUHP10-201ENST00000631979 980 ntBASIC6.22□□□□□ -1.41
PCNAP12004 AC135068.11-201ENST00000636378 921 ntBASIC6.22□□□□□ -1.41
PCNAP12004 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCNAP12004 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.22□□□□□ -1.41
PCNAP12004 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms