Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 AL645939.3-201ENST00000435408 225 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 RN7SL561P-201ENST00000488553 281 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 AC021146.11-201ENST00000503319 491 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TRIM38O00635 AC091849.1-201ENST00000509920 121 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 AC011853.1-201ENST00000518911 454 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.6□□□□□ -1.35
TRIM38O00635 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM38O00635 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 AC091133.5-201ENST00000603088 301 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 AC024933.1-201ENST00000608472 348 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 AL445649.1-201ENST00000615941 691 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 AL355377.1-201ENST00000621125 1653 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 OR10AB1P-202ENST00000641219 1686 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.6□□□□□ -1.35
TRIM38O00635 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
TRIM38O00635 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM38O00635 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
TRIM38O00635 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 AC007114.2-201ENST00000576014 4281 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 PPIAP24-201ENST00000328558 471 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 RNA5SP279-201ENST00000365513 117 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 RNU6-152P-201ENST00000384037 107 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM38O00635 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 RNU2-72P-201ENST00000411175 163 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.59□□□□□ -1.35
TRIM38O00635 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM38O00635 FAR1P1-201ENST00000427163 934 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 PAICSP2-201ENST00000429118 1150 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 MTND4LP14-201ENST00000429447 288 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM38O00635 ARL5AP3-201ENST00000439327 386 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 SEPT14P12-201ENST00000442280 560 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 RPSAP40-201ENST00000442343 891 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 TXNP2-201ENST00000443918 295 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM38O00635 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 AC092905.1-201ENST00000467527 949 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 AC022336.1-201ENST00000475510 337 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 RPL37AP8-201ENST00000494116 276 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 RN7SL187P-201ENST00000495587 303 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 PFN1P8-201ENST00000497012 543 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TRIM38O00635 AC021220.1-201ENST00000507445 630 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 HMGN1P16-201ENST00000508308 283 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM38O00635 MAST4-IT1-201ENST00000514241 658 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM38O00635 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM38O00635 KCTD9P4-201ENST00000526766 1166 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 OR52K3P-201ENST00000531655 943 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM38O00635 AC124891.1-201ENST00000536322 519 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TRIM38O00635 MIR6071-201ENST00000616741 78 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 AL356490.1-201ENST00000623079 479 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 AC073592.6-201ENST00000624271 415 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 AL035425.4-201ENST00000624509 1063 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 CASC19-274ENST00000642018 970 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.59□□□□□ -1.35
TRIM38O00635 AC119674.1-202ENST00000641333 1860 ntBASIC6.59□□□□□ -1.35
TRIM38O00635 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms