Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM97P2-201ENST00000517841 403 ntBASIC7.66□□□□□ -1.18
SOX1O00570 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SOX1O00570 AP006245.2-201ENST00000522004 300 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.66□□□□□ -1.18
SOX1O00570 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 AC090115.2-201ENST00000548060 883 ntBASIC7.66□□□□□ -1.18
SOX1O00570 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SOX1O00570 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 GARSP1-201ENST00000570895 719 ntBASIC7.66□□□□□ -1.18
SOX1O00570 MIR4700-201ENST00000578311 74 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 AC073648.5-201ENST00000603502 305 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC016877.3-201ENST00000606778 504 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC080013.4-201ENST00000607624 649 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AP000255.1-201ENST00000610276 676 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AC025588.4-201ENST00000615802 908 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AL158062.1-201ENST00000619632 745 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AL008636.1-201ENST00000625038 1018 ntBASIC7.66□□□□□ -1.18
SOX1O00570 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 CDY4P-201ENST00000418290 1513 ntBASIC7.66□□□□□ -1.18
SOX1O00570 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 GUCY2GP-201ENST00000479705 3222 ntBASIC7.66□□□□□ -1.18
SOX1O00570 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.66□□□□□ -1.18
SOX1O00570 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.66□□□□□ -1.18
SOX1O00570 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SOX1O00570 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.65□□□□□ -1.18
SOX1O00570 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC7.65□□□□□ -1.18
SOX1O00570 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SOX1O00570 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SOX1O00570 RNU6-697P-201ENST00000363348 107 ntBASIC7.65□□□□□ -1.18
SOX1O00570 LCN1P2-201ENST00000372030 223 ntBASIC7.65□□□□□ -1.18
SOX1O00570 RNU6-224P-201ENST00000384055 107 ntBASIC7.65□□□□□ -1.18
SOX1O00570 RNU6-1215P-201ENST00000384441 102 ntBASIC7.65□□□□□ -1.18
SOX1O00570 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SOX1O00570 SNORA17A-201ENST00000391185 133 ntBASIC7.65□□□□□ -1.18
SOX1O00570 BECN1P2-201ENST00000407947 812 ntBASIC7.65□□□□□ -1.18
SOX1O00570 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.65□□□□□ -1.18
SOX1O00570 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 RPS3P2-201ENST00000421346 701 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 NIPA2P1-201ENST00000426223 976 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 AC007365.2-201ENST00000428806 458 ntBASIC7.65□□□□□ -1.18
SOX1O00570 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 GAPDHP48-201ENST00000436626 961 ntBASIC7.65□□□□□ -1.18
SOX1O00570 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 RPL6P30-201ENST00000443382 862 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 OR2A3P-201ENST00000493774 953 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.65□□□□□ -1.18
SOX1O00570 AC021146.8-201ENST00000507455 733 ntBASIC7.65□□□□□ -1.18
SOX1O00570 HSPD1P11-201ENST00000508643 1702 ntBASIC7.65□□□□□ -1.18
SOX1O00570 LTV1P1-201ENST00000510683 1237 ntBASIC7.65□□□□□ -1.18
SOX1O00570 IGLC4-201ENST00000517690 248 ntBASIC7.65□□□□□ -1.18
SOX1O00570 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
SOX1O00570 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.65□□□□□ -1.18
SOX1O00570 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.65□□□□□ -1.18
SOX1O00570 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 AL162632.3-201ENST00000566976 1625 ntBASIC7.65□□□□□ -1.18
SOX1O00570 EEF1B2P1-201ENST00000567221 672 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AC002400.1-201ENST00000569310 726 ntBASIC7.65□□□□□ -1.18
SOX1O00570 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.65□□□□□ -1.18
SOX1O00570 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.65□□□□□ -1.18
SOX1O00570 AL020997.3-201ENST00000602843 359 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AC011451.2-201ENST00000604303 598 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AC073114.1-201ENST00000612027 490 ntBASIC7.65□□□□□ -1.18
SOX1O00570 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SOX1O00570 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC7.65□□□□□ -1.18
SOX1O00570 U6atac.1-201ENST00000616025 117 ntBASIC7.65□□□□□ -1.18
SOX1O00570 AC016769.4-201ENST00000616893 535 ntBASIC7.65□□□□□ -1.18
SOX1O00570 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SOX1O00570 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms