Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 OR6R1P-201ENST00000431838 940 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 ARMC4P1-201ENST00000438905 707 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 RPS18P1-201ENST00000447840 458 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC092824.1-201ENST00000483524 576 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 FTH1P8-201ENST00000498161 514 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AP003033.2-201ENST00000528901 805 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AL589765.6-201ENST00000601909 549 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC092474.3-201ENST00000603022 568 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AC007423.1-201ENST00000605009 627 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AL121936.2-201ENST00000641935 662 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 OR8A1-204ENST00000642111 1145 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AKAP17BP-201ENST00000431706 2719 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 RNA5SP77-201ENST00000365394 120 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC003045.1-201ENST00000398779 713 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AL589994.1-201ENST00000404962 340 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC003989.1-201ENST00000434569 565 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 COX4I1P2-201ENST00000447446 547 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 EEF1B2P3-201ENST00000447718 678 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 RN7SL393P-201ENST00000463588 296 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 OR7E22P-201ENST00000478335 1035 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC091965.3-201ENST00000506236 208 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 Vault.2-201ENST00000516519 98 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC011500.1-201ENST00000601963 469 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 BUB1P1-201ENST00000603541 607 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 AC093635.1-201ENST00000609028 555 ntBASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CHMP4CQ96CF2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 TNPO1P2-201ENST00000426249 2665 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 RNA5SP232-201ENST00000364144 119 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 SNORA40.4-201ENST00000390971 128 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 YWHAZP4-201ENST00000392459 708 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AL133260.1-201ENST00000405720 405 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 RNU2-72P-201ENST00000411175 163 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 GABARAPL3-201ENST00000412799 354 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms