Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 RPEP4-201ENST00000437636 602 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AL031681.1-201ENST00000443304 400 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC015524.1-201ENST00000491585 472 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC018645.1-201ENST00000505003 109 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC008945.1-201ENST00000505144 499 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC093664.1-201ENST00000511779 289 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AL133399.1-201ENST00000527476 298 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC037479.1-201ENST00000558361 625 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC004890.3-201ENST00000605566 1095 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AL353743.3-201ENST00000442109 1468 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 AC217777.1-201ENST00000570034 1471 ntBASIC5.2□□□□□ -1.58
RTN4IP1Q8WWV3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC079248.1-201ENST00000427568 1546 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 SNORD35A-201ENST00000363389 86 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 RNA5SP85-201ENST00000365378 119 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AL121977.1-201ENST00000401636 979 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 NME1P1-201ENST00000420914 382 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 GAPDHP19-201ENST00000431768 1005 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 PA2G4P1-201ENST00000442248 1197 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC112187.1-201ENST00000455837 479 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 RN7SL393P-201ENST00000463588 296 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC010343.2-201ENST00000510162 224 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 RPA2P3-201ENST00000533268 770 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 NPIPB1P-202ENST00000588786 828 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC093388.1-201ENST00000609166 430 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC006924.1-201ENST00000610750 559 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 AC023632.6-201ENST00000624338 2177 ntBASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTN4IP1Q8WWV3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AP000432.2-201ENST00000624164 2048 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms