Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 SNORD1C-201ENST00000363315 78 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 SOD1P1-201ENST00000407803 440 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 RNU2-5P-201ENST00000410533 180 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 RPL12P10-201ENST00000413498 498 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 RANP6-201ENST00000413691 644 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 VN1R3-201ENST00000418822 919 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AL139184.1-202ENST00000422303 222 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 CR391992.1-201ENST00000438601 394 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC112187.1-201ENST00000455837 479 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 UOX-201ENST00000471089 899 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 OR9A1P-202ENST00000484361 945 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC106760.2-201ENST00000504159 619 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC026782.2-201ENST00000510845 636 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC093878.1-201ENST00000515630 432 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC090953.1-201ENST00000604305 1092 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 MIR6762-201ENST00000613340 86 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AP005212.4-201ENST00000614206 710 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AL357153.4-201ENST00000620487 1016 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC127071.2-201ENST00000623293 527 ntBASIC5.31□□□□□ -1.56
BEST4Q8NFU0 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BEST4Q8NFU0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC095038.1-201ENST00000429248 1591 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC126474.2-201ENST00000623268 1750 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 PPIAP24-201ENST00000328558 471 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 SNORD16-201ENST00000362803 99 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 U3.10-201ENST00000364459 214 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 SNORA81-201ENST00000408493 178 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AL157884.1-201ENST00000424561 454 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 RPL21P42-201ENST00000488408 464 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC024085.1-201ENST00000604299 432 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC087468.1-201ENST00000604365 630 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC097641.3-201ENST00000613523 464 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 AC022960.2-201ENST00000616300 666 ntBASIC5.3□□□□□ -1.56
BEST4Q8NFU0 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BEST4Q8NFU0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms