Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 Z82198.3-201ENST00000421145 199 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AL354707.3-201ENST00000427308 331 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 IGLV3-4-201ENST00000432300 244 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AL731534.1-201ENST00000434711 269 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 CLNS1AP1-201ENST00000435954 682 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 KRT8P51-201ENST00000438938 274 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 RPL31P11-202ENST00000454082 372 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 OSTCP1-201ENST00000455507 450 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AC063955.1-201ENST00000462872 685 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 OR9A1P-202ENST00000484361 945 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 RN7SL350P-201ENST00000492591 299 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AL049779.3-201ENST00000557141 606 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AC006924.1-201ENST00000610750 559 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AC005899.7-201ENST00000618199 588 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
CCDC112Q8NEF3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC112Q8NEF3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 MIR133A2-201ENST00000347538 102 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 RNA5SP453-201ENST00000362503 119 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 SNORD16-201ENST00000362803 99 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 RN7SKP130-201ENST00000364924 301 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 NPM1P37-201ENST00000403105 874 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AKR1B10P1-201ENST00000425765 942 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 USP24P1-201ENST00000433802 779 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AC073410.1-201ENST00000435125 589 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 MINOS1P4-201ENST00000515470 318 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 MIR4312-201ENST00000579909 76 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 MIR6085-201ENST00000618314 110 ntBASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC112Q8NEF3 AC092701.1-201ENST00000623627 1551 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AL445238.1-204ENST00000400311 463 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AL033519.1-201ENST00000407266 307 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 NME1P1-201ENST00000420914 382 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AL354766.1-201ENST00000423396 542 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AL157884.1-201ENST00000424561 454 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 RPEP4-201ENST00000437636 602 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC117394.1-201ENST00000477323 567 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 RN7SL649P-201ENST00000496974 275 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 ST13P12-201ENST00000508958 1094 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC010343.2-201ENST00000510162 224 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms