Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL389915.1-201ENST00000422463 466 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 RWDD4P2-201ENST00000426392 563 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC007559.1-201ENST00000428736 355 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC239367.2-201ENST00000447309 705 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 OR51P1P-201ENST00000447547 942 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SAP18P3-201ENST00000449663 396 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 NDUFB11P1-201ENST00000455818 465 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC021205.1-201ENST00000468797 348 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC091133.4-201ENST00000511142 308 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 RPL10P19-201ENST00000519013 301 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC055716.1-201ENST00000550077 495 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 OR7E159P-201ENST00000553761 298 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC012186.1-201ENST00000566702 398 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SNORD39.2-201ENST00000579995 76 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 MIR548AB-201ENST00000584917 84 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 EIF5AP3-201ENST00000589460 462 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 PRYP3-202ENST00000607210 444 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AL022324.3-201ENST00000609330 747 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC091834.1-201ENST00000614543 472 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC005609.2-201ENST00000623320 592 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 FLII-230ENST00000628188 156 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 MIR3688-2-201ENST00000636963 87 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 LRRC77P-213ENST00000637727 880 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 HLA-B-257ENST00000640094 147 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC007996.1-201ENST00000620414 2821 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC003973.3-201ENST00000624863 2822 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC003045.1-201ENST00000398779 713 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 RN7SKP285-201ENST00000410137 318 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC068533.2-201ENST00000411872 306 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC092647.1-201ENST00000420654 287 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms