Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX7Q2KHR2 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 RNA5SP273-201ENST00000362484 113 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AL451046.1-201ENST00000406097 534 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 RPS3P2-201ENST00000421346 701 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 IPPKP1-201ENST00000422501 768 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AL512593.1-201ENST00000444758 779 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC008429.4-201ENST00000521201 182 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AL137246.2-201ENST00000613439 662 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 MIR6729-201ENST00000618194 65 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.47□□□□□ -1.21
RFX7Q2KHR2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.47□□□□□ -1.21
RFX7Q2KHR2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 SNORA21-201ENST00000362423 132 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 SUGT1P2-201ENST00000379452 992 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC073109.1-201ENST00000445066 978 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC023194.2-201ENST00000465398 406 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 CYP4F27P-201ENST00000514557 494 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 Y_RNA.710-201ENST00000516975 110 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC100767.2-201ENST00000604840 693 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC079414.3-201ENST00000612986 1090 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 AC008691.1-209ENST00000642094 814 ntBASIC7.46□□□□□ -1.21
RFX7Q2KHR2 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RFX7Q2KHR2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 RNU1-150P-201ENST00000362491 162 ntBASIC7.46□□□□□ -1.22
RFX7Q2KHR2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 RN7SKP144-201ENST00000411108 279 ntBASIC7.46□□□□□ -1.22
RFX7Q2KHR2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 CDY8P-201ENST00000428380 1279 ntBASIC7.46□□□□□ -1.22
RFX7Q2KHR2 AL353662.1-201ENST00000439099 327 ntBASIC7.46□□□□□ -1.22
RFX7Q2KHR2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX7Q2KHR2 CDY20P-201ENST00000447528 1279 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms