Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 RNA5SP429-201ENST00000363688 109 ntBASIC6.85□□□□□ -1.31
TPM4P67936 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
TPM4P67936 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.85□□□□□ -1.31
TPM4P67936 AC139713.1-202ENST00000512366 460 ntBASIC6.85□□□□□ -1.31
TPM4P67936 snoU109.5-201ENST00000516231 132 ntBASIC6.85□□□□□ -1.31
TPM4P67936 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.85□□□□□ -1.31
TPM4P67936 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
TPM4P67936 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 RN7SL131P-201ENST00000579043 256 ntBASIC6.85□□□□□ -1.31
TPM4P67936 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.85□□□□□ -1.31
TPM4P67936 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.85□□□□□ -1.31
TPM4P67936 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.85□□□□□ -1.31
TPM4P67936 uc_338.33-201ENST00000614988 170 ntBASIC6.85□□□□□ -1.31
TPM4P67936 AL137067.2-201ENST00000621202 131 ntBASIC6.85□□□□□ -1.31
TPM4P67936 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.85□□□□□ -1.31
TPM4P67936 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 AC016745.2-201ENST00000608834 3443 ntBASIC6.85□□□□□ -1.31
TPM4P67936 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.84□□□□□ -1.31
TPM4P67936 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM4P67936 RNU1-84P-201ENST00000365447 164 ntBASIC6.84□□□□□ -1.31
TPM4P67936 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM4P67936 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
TPM4P67936 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.84□□□□□ -1.31
TPM4P67936 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM4P67936 RN7SKP221-201ENST00000410420 301 ntBASIC6.84□□□□□ -1.31
TPM4P67936 AL672212.1-201ENST00000422246 400 ntBASIC6.84□□□□□ -1.31
TPM4P67936 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM4P67936 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 RN7SL369P-201ENST00000477138 299 ntBASIC6.84□□□□□ -1.31
TPM4P67936 RN7SL70P-201ENST00000478322 302 ntBASIC6.84□□□□□ -1.31
TPM4P67936 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.84□□□□□ -1.31
TPM4P67936 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM4P67936 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.84□□□□□ -1.31
TPM4P67936 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 AC133552.4-201ENST00000576103 676 ntBASIC6.84□□□□□ -1.31
TPM4P67936 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 MIR4258-201ENST00000580920 91 ntBASIC6.84□□□□□ -1.31
TPM4P67936 AP001357.1-201ENST00000586304 1053 ntBASIC6.84□□□□□ -1.31
TPM4P67936 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.84□□□□□ -1.31
TPM4P67936 AC069542.2-201ENST00000624816 216 ntBASIC6.84□□□□□ -1.31
TPM4P67936 OR7A1P-202ENST00000641542 1158 ntBASIC6.84□□□□□ -1.31
TPM4P67936 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.84□□□□□ -1.31
TPM4P67936 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.84□□□□□ -1.31
TPM4P67936 AC024651.2-201ENST00000562480 2098 ntBASIC6.84□□□□□ -1.31
TPM4P67936 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TPM4P67936 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.84□□□□□ -1.31
TPM4P67936 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TPM4P67936 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TPM4P67936 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM4P67936 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.83□□□□□ -1.32
TPM4P67936 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 AC079248.1-201ENST00000427568 1546 ntBASIC6.83□□□□□ -1.32
TPM4P67936 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TPM4P67936 USP24P1-201ENST00000433802 779 ntBASIC6.83□□□□□ -1.32
TPM4P67936 AC019185.3-201ENST00000438805 323 ntBASIC6.83□□□□□ -1.32
TPM4P67936 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.83□□□□□ -1.32
TPM4P67936 COL11A2P1-205ENST00000441798 676 ntBASIC6.83□□□□□ -1.32
TPM4P67936 RPS7P4-201ENST00000444127 582 ntBASIC6.83□□□□□ -1.32
TPM4P67936 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.83□□□□□ -1.32
TPM4P67936 AL845321.1-201ENST00000444603 348 ntBASIC6.83□□□□□ -1.32
TPM4P67936 AC090602.1-201ENST00000469695 252 ntBASIC6.83□□□□□ -1.32
TPM4P67936 RN7SL326P-201ENST00000477493 296 ntBASIC6.83□□□□□ -1.32
TPM4P67936 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TPM4P67936 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 IGKV1D-32-201ENST00000517449 318 ntBASIC6.83□□□□□ -1.32
TPM4P67936 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TPM4P67936 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.83□□□□□ -1.32
TPM4P67936 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms