Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.87□□□□□ -1.15
USP11P51784 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 AC015871.3-201ENST00000618835 2261 ntBASIC7.87□□□□□ -1.15
USP11P51784 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
USP11P51784 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.87□□□□□ -1.15
USP11P51784 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USP11P51784 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
USP11P51784 ELL2P3-201ENST00000457883 1602 ntBASIC7.86□□□□□ -1.15
USP11P51784 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC7.86□□□□□ -1.15
USP11P51784 GSTA8P-201ENST00000404253 637 ntBASIC7.86□□□□□ -1.15
USP11P51784 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.86□□□□□ -1.15
USP11P51784 RPLP1P10-201ENST00000413972 339 ntBASIC7.86□□□□□ -1.15
USP11P51784 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 DUTP4-201ENST00000424782 475 ntBASIC7.86□□□□□ -1.15
USP11P51784 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.86□□□□□ -1.15
USP11P51784 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 SLAMF6P1-201ENST00000451067 602 ntBASIC7.86□□□□□ -1.15
USP11P51784 RPL7AP71-201ENST00000451120 739 ntBASIC7.86□□□□□ -1.15
USP11P51784 RPL31P3-201ENST00000458430 332 ntBASIC7.86□□□□□ -1.15
USP11P51784 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.86□□□□□ -1.15
USP11P51784 AC093663.2-201ENST00000484625 313 ntBASIC7.86□□□□□ -1.15
USP11P51784 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 AC113420.1-201ENST00000507903 571 ntBASIC7.86□□□□□ -1.15
USP11P51784 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 AC096661.1-201ENST00000515870 822 ntBASIC7.86□□□□□ -1.15
USP11P51784 RNA5SP318-201ENST00000516352 92 ntBASIC7.86□□□□□ -1.15
USP11P51784 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 OR7E128P-201ENST00000532736 1024 ntBASIC7.86□□□□□ -1.15
USP11P51784 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 AC023161.2-201ENST00000551218 780 ntBASIC7.86□□□□□ -1.15
USP11P51784 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.86□□□□□ -1.15
USP11P51784 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC7.86□□□□□ -1.15
USP11P51784 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC7.86□□□□□ -1.15
USP11P51784 AC067773.1-201ENST00000603284 1094 ntBASIC7.86□□□□□ -1.15
USP11P51784 AP001596.2-201ENST00000608410 312 ntBASIC7.86□□□□□ -1.15
USP11P51784 PTCHD3P1-201ENST00000612350 537 ntBASIC7.86□□□□□ -1.15
USP11P51784 AP003499.2-201ENST00000624100 483 ntBASIC7.86□□□□□ -1.15
USP11P51784 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
USP11P51784 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.86□□□□□ -1.15
USP11P51784 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USP11P51784 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.86□□□□□ -1.15
USP11P51784 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.85□□□□□ -1.15
USP11P51784 AC104162.1-201ENST00000430831 2382 ntBASIC7.85□□□□□ -1.15
USP11P51784 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.85□□□□□ -1.15
USP11P51784 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.85□□□□□ -1.15
USP11P51784 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.85□□□□□ -1.15
USP11P51784 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 AC073342.2-201ENST00000595842 1800 ntBASIC7.85□□□□□ -1.15
USP11P51784 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
USP11P51784 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 AC092821.2-201ENST00000545710 2042 ntBASIC7.85□□□□□ -1.15
USP11P51784 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.85□□□□□ -1.15
USP11P51784 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.85□□□□□ -1.15
USP11P51784 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
USP11P51784 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
USP11P51784 PPIAP26-201ENST00000377951 522 ntBASIC7.85□□□□□ -1.15
USP11P51784 MIR187-201ENST00000385062 109 ntBASIC7.85□□□□□ -1.15
USP11P51784 RPL9P21-201ENST00000392269 505 ntBASIC7.85□□□□□ -1.15
USP11P51784 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.85□□□□□ -1.15
USP11P51784 AL355615.1-201ENST00000406187 641 ntBASIC7.85□□□□□ -1.15
USP11P51784 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC7.85□□□□□ -1.15
USP11P51784 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.85□□□□□ -1.15
USP11P51784 USP9YP26-201ENST00000421008 661 ntBASIC7.85□□□□□ -1.15
USP11P51784 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC7.85□□□□□ -1.15
USP11P51784 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.85□□□□□ -1.15
USP11P51784 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.85□□□□□ -1.15
USP11P51784 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms