Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.75□□□□□ -1.33
SSR1P43307 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.75□□□□□ -1.33
SSR1P43307 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.75□□□□□ -1.33
SSR1P43307 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 AC093325.1-201ENST00000508378 326 ntBASIC6.75□□□□□ -1.33
SSR1P43307 SETP21-201ENST00000514799 892 ntBASIC6.75□□□□□ -1.33
SSR1P43307 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 CHEK2P2-201ENST00000554701 672 ntBASIC6.75□□□□□ -1.33
SSR1P43307 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 OR4C49P-201ENST00000563891 900 ntBASIC6.75□□□□□ -1.33
SSR1P43307 AC233702.7-202ENST00000582941 211 ntBASIC6.75□□□□□ -1.33
SSR1P43307 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SSR1P43307 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.74□□□□□ -1.33
SSR1P43307 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.74□□□□□ -1.33
SSR1P43307 AC133552.1-201ENST00000569988 4007 ntBASIC6.74□□□□□ -1.33
SSR1P43307 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.74□□□□□ -1.33
SSR1P43307 RNU6-249P-201ENST00000363016 102 ntBASIC6.74□□□□□ -1.33
SSR1P43307 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 AC006509.1-201ENST00000420788 634 ntBASIC6.74□□□□□ -1.33
SSR1P43307 CYCSP52-201ENST00000422857 310 ntBASIC6.74□□□□□ -1.33
SSR1P43307 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.74□□□□□ -1.33
SSR1P43307 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.74□□□□□ -1.33
SSR1P43307 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.74□□□□□ -1.33
SSR1P43307 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.74□□□□□ -1.33
SSR1P43307 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.74□□□□□ -1.33
SSR1P43307 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.74□□□□□ -1.33
SSR1P43307 RPL29P33-201ENST00000587474 316 ntBASIC6.74□□□□□ -1.33
SSR1P43307 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.74□□□□□ -1.33
SSR1P43307 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.74□□□□□ -1.33
SSR1P43307 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSR1P43307 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.74□□□□□ -1.33
SSR1P43307 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
SSR1P43307 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
SSR1P43307 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
SSR1P43307 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SSR1P43307 AP003170.5-201ENST00000397185 335 ntBASIC6.73□□□□□ -1.33
SSR1P43307 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 U3.43-201ENST00000410734 213 ntBASIC6.73□□□□□ -1.33
SSR1P43307 AC002524.1-201ENST00000411687 547 ntBASIC6.73□□□□□ -1.33
SSR1P43307 UBE2V1P14-201ENST00000415815 558 ntBASIC6.73□□□□□ -1.33
SSR1P43307 VTI1BP4-201ENST00000427516 527 ntBASIC6.73□□□□□ -1.33
SSR1P43307 SNX18P26-201ENST00000458433 740 ntBASIC6.73□□□□□ -1.33
SSR1P43307 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.73□□□□□ -1.33
SSR1P43307 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 FTH1P11-201ENST00000517577 551 ntBASIC6.73□□□□□ -1.33
SSR1P43307 IGKV1D-22-201ENST00000518953 324 ntBASIC6.73□□□□□ -1.33
SSR1P43307 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SSR1P43307 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.73□□□□□ -1.33
SSR1P43307 AC023080.1-201ENST00000551663 931 ntBASIC6.73□□□□□ -1.33
SSR1P43307 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.73□□□□□ -1.33
SSR1P43307 AC090616.1-201ENST00000583895 447 ntBASIC6.73□□□□□ -1.33
SSR1P43307 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 AC063977.7-201ENST00000594454 337 ntBASIC6.73□□□□□ -1.33
SSR1P43307 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 MIR6849-201ENST00000618543 69 ntBASIC6.73□□□□□ -1.33
SSR1P43307 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 AC087516.1-201ENST00000561236 2428 ntBASIC6.73□□□□□ -1.33
SSR1P43307 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SSR1P43307 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
SSR1P43307 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
SSR1P43307 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.73□□□□□ -1.33
SSR1P43307 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.73□□□□□ -1.33
SSR1P43307 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSR1P43307 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms