Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 AL117378.2-201ENST00000622916 1337 ntBASIC7.05□□□□□ -1.28
CIITAP33076 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 AC007406.5-201ENST00000570140 3170 ntBASIC7.05□□□□□ -1.28
CIITAP33076 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CIITAP33076 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 LINC01616-201ENST00000561816 2280 ntBASIC7.05□□□□□ -1.28
CIITAP33076 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.05□□□□□ -1.28
CIITAP33076 SNORA43.1-201ENST00000364863 140 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.05□□□□□ -1.28
CIITAP33076 RN7SKP144-201ENST00000411108 279 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AL353626.3-201ENST00000413399 657 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.05□□□□□ -1.28
CIITAP33076 RPL7AP14-201ENST00000424041 802 ntBASIC7.05□□□□□ -1.28
CIITAP33076 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.05□□□□□ -1.28
CIITAP33076 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.05□□□□□ -1.28
CIITAP33076 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.05□□□□□ -1.28
CIITAP33076 AL355355.1-201ENST00000442900 793 ntBASIC7.05□□□□□ -1.28
CIITAP33076 GAPDHP23-201ENST00000444823 993 ntBASIC7.05□□□□□ -1.28
CIITAP33076 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.05□□□□□ -1.28
CIITAP33076 AC097463.1-201ENST00000447288 481 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.05□□□□□ -1.28
CIITAP33076 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.05□□□□□ -1.28
CIITAP33076 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.05□□□□□ -1.28
CIITAP33076 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.05□□□□□ -1.28
CIITAP33076 AC006512.2-201ENST00000543250 486 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AC084033.1-201ENST00000550830 633 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.05□□□□□ -1.28
CIITAP33076 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.05□□□□□ -1.28
CIITAP33076 AL161912.3-201ENST00000605404 628 ntBASIC7.05□□□□□ -1.28
CIITAP33076 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 AC073593.1-201ENST00000624500 411 ntBASIC7.05□□□□□ -1.28
CIITAP33076 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.05□□□□□ -1.28
CIITAP33076 AL596275.2-208ENST00000641192 594 ntBASIC7.05□□□□□ -1.28
CIITAP33076 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CIITAP33076 AC024651.2-201ENST00000562480 2098 ntBASIC7.05□□□□□ -1.28
CIITAP33076 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CIITAP33076 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CIITAP33076 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.04□□□□□ -1.28
CIITAP33076 EIF3EP1-201ENST00000433978 1316 ntBASIC7.04□□□□□ -1.28
CIITAP33076 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.04□□□□□ -1.28
CIITAP33076 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.04□□□□□ -1.28
CIITAP33076 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
CIITAP33076 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.04□□□□□ -1.28
CIITAP33076 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 AL359976.1-201ENST00000418655 3528 ntBASIC7.04□□□□□ -1.28
CIITAP33076 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.04□□□□□ -1.28
CIITAP33076 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.04□□□□□ -1.28
CIITAP33076 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.04□□□□□ -1.28
CIITAP33076 AC007679.3-201ENST00000434035 414 ntBASIC7.04□□□□□ -1.28
CIITAP33076 SUMO2P8-201ENST00000434672 286 ntBASIC7.04□□□□□ -1.28
CIITAP33076 PNKDP1-201ENST00000435914 430 ntBASIC7.04□□□□□ -1.28
CIITAP33076 AL136455.1-201ENST00000441083 1240 ntBASIC7.04□□□□□ -1.28
CIITAP33076 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.04□□□□□ -1.28
CIITAP33076 OR52I1-201ENST00000450052 1050 ntBASIC7.04□□□□□ -1.28
CIITAP33076 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.04□□□□□ -1.28
CIITAP33076 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.04□□□□□ -1.28
CIITAP33076 RN7SL170P-201ENST00000487098 295 ntBASIC7.04□□□□□ -1.28
CIITAP33076 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.04□□□□□ -1.28
CIITAP33076 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.04□□□□□ -1.28
CIITAP33076 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC7.04□□□□□ -1.28
CIITAP33076 Y_RNA.710-201ENST00000516975 110 ntBASIC7.04□□□□□ -1.28
CIITAP33076 AC009879.1-201ENST00000520029 839 ntBASIC7.04□□□□□ -1.28
CIITAP33076 OR6M2P-201ENST00000529831 871 ntBASIC7.04□□□□□ -1.28
CIITAP33076 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.04□□□□□ -1.28
CIITAP33076 MRPS21P8-201ENST00000569196 235 ntBASIC7.04□□□□□ -1.28
CIITAP33076 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.04□□□□□ -1.28
CIITAP33076 AC103798.2-201ENST00000624292 632 ntBASIC7.04□□□□□ -1.28
CIITAP33076 OR7A1P-202ENST00000641542 1158 ntBASIC7.04□□□□□ -1.28
CIITAP33076 AC087269.2-201ENST00000641764 975 ntBASIC7.04□□□□□ -1.28
CIITAP33076 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.04□□□□□ -1.28
CIITAP33076 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.04□□□□□ -1.28
CIITAP33076 OR52B5P-204ENST00000641744 3467 ntBASIC7.04□□□□□ -1.28
CIITAP33076 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.04□□□□□ -1.28
CIITAP33076 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CIITAP33076 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.04□□□□□ -1.28
CIITAP33076 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms