Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 MIR433-201ENST00000384837 93 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 RNU11-6P-201ENST00000391127 133 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AL451046.1-201ENST00000406097 534 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC007562.1-201ENST00000421819 517 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC083862.1-201ENST00000427378 1242 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC010086.1-201ENST00000437359 1052 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 GTF2IP14-201ENST00000441415 586 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 GAPDHP37-201ENST00000442317 968 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC023274.2-201ENST00000445264 521 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC098818.1-201ENST00000478593 252 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AL133399.1-201ENST00000527476 298 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC007494.1-201ENST00000562293 760 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC027229.1-201ENST00000583887 253 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AL589863.1-201ENST00000595383 631 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 NDUFB9P1-201ENST00000604683 510 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC009779.8-202ENST00000607990 932 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 MIR6823-201ENST00000622118 61 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC125238.2-201ENST00000430003 1440 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 RPL31P11-201ENST00000426558 1558 ntBASIC4.77□□□□□ -1.65
HLA-DMBP28068 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DMBP28068 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HLA-DMBP28068 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC074141.1-201ENST00000588129 2995 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 SNORD16-201ENST00000362803 99 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 RNA5SP85-201ENST00000365378 119 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 RNU1-84P-201ENST00000365447 164 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 AL445238.1-204ENST00000400311 463 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 AL133260.1-201ENST00000405720 405 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 RPL7AP51-201ENST00000422016 760 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC128677.1-201ENST00000436016 442 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 COL11A2P1-205ENST00000441798 676 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 OR13K1P-201ENST00000444577 975 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC009963.4-201ENST00000448535 339 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC019084.1-201ENST00000457337 432 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC073594.1-201ENST00000462065 364 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 RN7SL413P-201ENST00000482700 297 ntBASIC4.76□□□□□ -1.65
HLA-DMBP28068 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DMBP28068 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DMBP28068 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms