Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.57□□□□□ -1.04
ATF3P18847 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.57□□□□□ -1.04
ATF3P18847 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.57□□□□□ -1.04
ATF3P18847 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.57□□□□□ -1.04
ATF3P18847 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC8.57□□□□□ -1.04
ATF3P18847 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.57□□□□□ -1.04
ATF3P18847 BX510359.5-201ENST00000515651 304 ntBASIC8.57□□□□□ -1.04
ATF3P18847 IGHV3-57-201ENST00000520143 280 ntBASIC8.57□□□□□ -1.04
ATF3P18847 EIF4A2P5-201ENST00000529914 499 ntBASIC8.57□□□□□ -1.04
ATF3P18847 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.57□□□□□ -1.04
ATF3P18847 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.57□□□□□ -1.04
ATF3P18847 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.57□□□□□ -1.04
ATF3P18847 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.57□□□□□ -1.04
ATF3P18847 AL008723.3-201ENST00000608926 449 ntBASIC8.57□□□□□ -1.04
ATF3P18847 AL137246.2-201ENST00000613439 662 ntBASIC8.57□□□□□ -1.04
ATF3P18847 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.57□□□□□ -1.04
ATF3P18847 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.57□□□□□ -1.04
ATF3P18847 CASC19-222ENST00000641321 1173 ntBASIC8.57□□□□□ -1.04
ATF3P18847 XRCC6P5-201ENST00000435236 1795 ntBASIC8.57□□□□□ -1.04
ATF3P18847 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.57□□□□□ -1.04
ATF3P18847 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
ATF3P18847 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATF3P18847 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATF3P18847 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATF3P18847 AC011455.2-201ENST00000599320 3336 ntBASIC8.57□□□□□ -1.04
ATF3P18847 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ATF3P18847 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.57□□□□□ -1.04
ATF3P18847 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ATF3P18847 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 AC015871.3-201ENST00000618835 2261 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.56□□□□□ -1.04
ATF3P18847 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
ATF3P18847 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.56□□□□□ -1.04
ATF3P18847 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.56□□□□□ -1.04
ATF3P18847 RNA5SP46-201ENST00000362370 120 ntBASIC8.56□□□□□ -1.04
ATF3P18847 RNU6-171P-201ENST00000384354 107 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AP000534.2-201ENST00000412729 568 ntBASIC8.56□□□□□ -1.04
ATF3P18847 OR2AT2P-201ENST00000413438 905 ntBASIC8.56□□□□□ -1.04
ATF3P18847 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.56□□□□□ -1.04
ATF3P18847 RFESDP1-201ENST00000422350 461 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AC006455.6-201ENST00000426192 893 ntBASIC8.56□□□□□ -1.04
ATF3P18847 SPRYD7P1-201ENST00000443861 570 ntBASIC8.56□□□□□ -1.04
ATF3P18847 ZNF619P1-201ENST00000446539 752 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AC098799.1-201ENST00000504752 800 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AC021733.2-201ENST00000518830 497 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.56□□□□□ -1.04
ATF3P18847 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.56□□□□□ -1.04
ATF3P18847 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.56□□□□□ -1.04
ATF3P18847 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.56□□□□□ -1.04
ATF3P18847 AL356801.1-201ENST00000559320 294 ntBASIC8.56□□□□□ -1.04
ATF3P18847 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
ATF3P18847 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.56□□□□□ -1.04
ATF3P18847 AC022960.2-201ENST00000616300 666 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AC012653.2-201ENST00000621880 420 ntBASIC8.56□□□□□ -1.04
ATF3P18847 AC021766.1-201ENST00000624404 741 ntBASIC8.56□□□□□ -1.04
ATF3P18847 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.56□□□□□ -1.04
ATF3P18847 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
ATF3P18847 AL161901.1-201ENST00000624954 3425 ntBASIC8.56□□□□□ -1.04
ATF3P18847 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATF3P18847 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
ATF3P18847 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATF3P18847 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATF3P18847 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
ATF3P18847 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATF3P18847 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.55□□□□□ -1.04
ATF3P18847 AL136981.1-203ENST00000451452 3844 ntBASIC8.55□□□□□ -1.04
ATF3P18847 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.55□□□□□ -1.04
ATF3P18847 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATF3P18847 MIPEPP2-201ENST00000422560 1819 ntBASIC8.55□□□□□ -1.04
ATF3P18847 SNORA64.1-201ENST00000362600 132 ntBASIC8.55□□□□□ -1.04
ATF3P18847 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATF3P18847 MIR585-201ENST00000384887 94 ntBASIC8.55□□□□□ -1.04
ATF3P18847 RPL5P5-201ENST00000392009 893 ntBASIC8.55□□□□□ -1.04
ATF3P18847 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
ATF3P18847 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.55□□□□□ -1.04
ATF3P18847 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.55□□□□□ -1.04
ATF3P18847 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.55□□□□□ -1.04
ATF3P18847 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC8.55□□□□□ -1.04
ATF3P18847 RPL5P9-201ENST00000448118 886 ntBASIC8.55□□□□□ -1.04
ATF3P18847 RN7SL826P-201ENST00000479724 288 ntBASIC8.55□□□□□ -1.04
ATF3P18847 NDUFA5P12-201ENST00000503796 343 ntBASIC8.55□□□□□ -1.04
ATF3P18847 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATF3P18847 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC8.55□□□□□ -1.04
ATF3P18847 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC8.55□□□□□ -1.04
ATF3P18847 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
ATF3P18847 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.55□□□□□ -1.04
ATF3P18847 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATF3P18847 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms