Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC008055.1-201ENST00000547032 609 ntBASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC009729.1-201ENST00000548873 1133 ntBASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.65□□□□□ -1.5
HLA-DOBP13765 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HLA-DOBP13765 MIR3157-201ENST00000578688 85 ntBASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC087468.1-201ENST00000604365 630 ntBASIC5.65□□□□□ -1.5
HLA-DOBP13765 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC144521.1-201ENST00000607148 956 ntBASIC5.65□□□□□ -1.5
HLA-DOBP13765 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DOBP13765 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC104307.1-201ENST00000616142 196 ntBASIC5.65□□□□□ -1.5
HLA-DOBP13765 AC089999.3-201ENST00000622440 577 ntBASIC5.65□□□□□ -1.5
HLA-DOBP13765 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
HLA-DOBP13765 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.65□□□□□ -1.51
HLA-DOBP13765 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
HLA-DOBP13765 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.65□□□□□ -1.51
HLA-DOBP13765 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.65□□□□□ -1.51
HLA-DOBP13765 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HLA-DOBP13765 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DOBP13765 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DOBP13765 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DOBP13765 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HLA-DOBP13765 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 SNORD8-201ENST00000363915 110 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 RNA5SP77-201ENST00000365394 120 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AP003170.5-201ENST00000397185 335 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 RN7SKP161-201ENST00000411110 305 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 RPL21P50-201ENST00000417698 477 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 SEC63P1-201ENST00000425785 1258 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 GAPDHP19-201ENST00000431768 1005 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC064862.5-201ENST00000440618 334 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC245291.3-201ENST00000443400 292 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC234771.2-201ENST00000445718 597 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC103563.5-201ENST00000455643 364 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 RN7SL393P-201ENST00000463588 296 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 RPL17P2-201ENST00000491913 451 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC138517.1-201ENST00000515724 568 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 TDGP1-201ENST00000543961 1229 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 MIR3189-201ENST00000578735 73 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC012368.3-201ENST00000604190 219 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 AC007603.3-201ENST00000636915 979 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 OR7E91P-202ENST00000642062 1198 ntBASIC5.64□□□□□ -1.51
HLA-DOBP13765 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HLA-DOBP13765 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.64□□□□□ -1.51
HLA-DOBP13765 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOBP13765 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOBP13765 RNF19BPY-201ENST00000458209 1550 ntBASIC5.63□□□□□ -1.51
HLA-DOBP13765 AC024341.1-201ENST00000526444 1552 ntBASIC5.63□□□□□ -1.51
HLA-DOBP13765 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOBP13765 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
HLA-DOBP13765 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms