Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 RN7SKP186-201ENST00000365371 303 ntBASIC6□□□□□ -1.45
SNX3O60493 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6□□□□□ -1.45
SNX3O60493 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 U3.52-201ENST00000384034 216 ntBASIC6□□□□□ -1.45
SNX3O60493 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 NPM1P31-201ENST00000399021 764 ntBASIC6□□□□□ -1.45
SNX3O60493 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 RN7SKP166-201ENST00000410812 305 ntBASIC6□□□□□ -1.45
SNX3O60493 RANP6-201ENST00000413691 644 ntBASIC6□□□□□ -1.45
SNX3O60493 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6□□□□□ -1.45
SNX3O60493 BX119904.3-201ENST00000428194 957 ntBASIC6□□□□□ -1.45
SNX3O60493 SNX18P9-201ENST00000440580 835 ntBASIC6□□□□□ -1.45
SNX3O60493 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6□□□□□ -1.45
SNX3O60493 RPL12P39-201ENST00000455456 496 ntBASIC6□□□□□ -1.45
SNX3O60493 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6□□□□□ -1.45
SNX3O60493 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 Z99943.2-201ENST00000507585 266 ntBASIC6□□□□□ -1.45
SNX3O60493 GLUD1P3-202ENST00000508551 200 ntBASIC6□□□□□ -1.45
SNX3O60493 OR51A1P-201ENST00000511110 946 ntBASIC6□□□□□ -1.45
SNX3O60493 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6□□□□□ -1.45
SNX3O60493 CARSP2-201ENST00000520688 277 ntBASIC6□□□□□ -1.45
SNX3O60493 AC078899.1-201ENST00000521432 1185 ntBASIC6□□□□□ -1.45
SNX3O60493 OR4C1P-201ENST00000530880 937 ntBASIC6□□□□□ -1.45
SNX3O60493 MIR4800-201ENST00000537353 80 ntBASIC6□□□□□ -1.45
SNX3O60493 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6□□□□□ -1.45
SNX3O60493 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6□□□□□ -1.45
SNX3O60493 AC004805.3-201ENST00000603178 310 ntBASIC6□□□□□ -1.45
SNX3O60493 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6□□□□□ -1.45
SNX3O60493 SNX18P12-201ENST00000624821 759 ntBASIC6□□□□□ -1.45
SNX3O60493 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX3O60493 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6□□□□□ -1.45
SNX3O60493 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6□□□□□ -1.45
SNX3O60493 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SNX3O60493 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
SNX3O60493 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SNX3O60493 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SNX3O60493 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SNX3O60493 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
SNX3O60493 RN7SKP185-201ENST00000362813 326 ntBASIC5.99□□□□□ -1.45
SNX3O60493 RNA5SP152-201ENST00000365184 110 ntBASIC5.99□□□□□ -1.45
SNX3O60493 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SNX3O60493 TRAV35-201ENST00000390462 330 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AC087752.1-201ENST00000391360 558 ntBASIC5.99□□□□□ -1.45
SNX3O60493 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX3O60493 AC000089.1-201ENST00000424559 801 ntBASIC5.99□□□□□ -1.45
SNX3O60493 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.99□□□□□ -1.45
SNX3O60493 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.99□□□□□ -1.45
SNX3O60493 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX3O60493 GAPDHP23-201ENST00000444823 993 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AC023271.1-201ENST00000445936 1090 ntBASIC5.99□□□□□ -1.45
SNX3O60493 RPS23P9-201ENST00000448848 438 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX3O60493 RN7SL197P-201ENST00000466981 299 ntBASIC5.99□□□□□ -1.45
SNX3O60493 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 RPL7AP56-201ENST00000476420 791 ntBASIC5.99□□□□□ -1.45
SNX3O60493 RPL5P3-201ENST00000493817 889 ntBASIC5.99□□□□□ -1.45
SNX3O60493 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX3O60493 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX3O60493 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX3O60493 SNORA70.11-201ENST00000515987 138 ntBASIC5.99□□□□□ -1.45
SNX3O60493 SNORA70.13-201ENST00000516116 138 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 AC092865.1-201ENST00000544395 1023 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX3O60493 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.99□□□□□ -1.45
SNX3O60493 AC027216.1-201ENST00000577726 685 ntBASIC5.99□□□□□ -1.45
SNX3O60493 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AC002069.2-201ENST00000603580 883 ntBASIC5.99□□□□□ -1.45
SNX3O60493 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.99□□□□□ -1.45
SNX3O60493 AL022394.1-201ENST00000606979 292 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.99□□□□□ -1.45
SNX3O60493 AC002044.3-201ENST00000623314 541 ntBASIC5.99□□□□□ -1.45
SNX3O60493 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX3O60493 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX3O60493 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX3O60493 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.99□□□□□ -1.45
SNX3O60493 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
SNX3O60493 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX3O60493 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX3O60493 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms