Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 RN7SKP281-201ENST00000410472 352 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC013268.2-201ENST00000420753 337 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC092865.3-201ENST00000425390 1026 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC069154.1-201ENST00000432914 542 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 RPS10P18-201ENST00000442662 495 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 SNX18P25-201ENST00000510539 758 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 RNU4-18P-201ENST00000516751 149 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AP004607.6-201ENST00000525033 1202 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC018558.5-201ENST00000565840 952 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 MIR4310-201ENST00000582950 57 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AL137058.3-201ENST00000624531 3099 ntBASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA3F8WFD2 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC130360.2-201ENST00000533477 1556 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 RAD17P2-201ENST00000451754 1977 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AL049634.1-201ENST00000453770 1720 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 PABPC1P8-201ENST00000452851 2086 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 RPL23AP85-201ENST00000421838 433 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 TRGV7-201ENST00000427089 353 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC007679.3-201ENST00000434035 414 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 UBE2V2P1-201ENST00000434717 398 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 EMC3-AS1-205ENST00000438698 534 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AL645936.1-201ENST00000441979 518 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 VN1R38P-201ENST00000450265 887 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 RPL23AP64-201ENST00000469465 435 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AP002453.1-201ENST00000492327 668 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AP001960.1-201ENST00000506494 658 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC113398.2-201ENST00000507630 558 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC073581.1-201ENST00000519036 575 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC008676.3-201ENST00000521237 435 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AC002044.3-201ENST00000623314 541 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AL357140.4-201ENST00000636827 412 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 MIR1910-201ENST00000636955 80 ntBASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 412.8 ms