Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 TMA16P2-201ENST00000413187 601 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC066692.1-201ENST00000421721 457 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC092967.1-201ENST00000449016 481 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AL359839.1-201ENST00000451975 1160 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 RPL5P12-201ENST00000477071 851 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 RN7SL326P-201ENST00000477493 296 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 RN7SL714P-201ENST00000487050 298 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 OR4A40P-201ENST00000533878 948 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC092332.1-201ENST00000563684 829 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AP000894.4-201ENST00000610185 483 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC024255.1-201ENST00000614376 102 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC119674.1-213ENST00000641177 1386 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AL662795.2-201ENST00000624252 3706 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 AC093225.1-201ENST00000506867 1408 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 DOCK11P1-201ENST00000553480 5932 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 PRNCR1-201ENST00000635449 12727 ntBASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.59□□□□□ -1.19
RPAP1Q9BWH6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 RPS7P14-201ENST00000426405 583 ntBASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 RPS27AP3-201ENST00000453803 454 ntBASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 LDHAP1-201ENST00000509421 992 ntBASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 AC010343.2-201ENST00000510162 224 ntBASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 IGLVIV-64-201ENST00000518581 301 ntBASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 AC005332.4-201ENST00000592752 579 ntBASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 AL512356.3-201ENST00000623005 461 ntBASIC7.59□□□□□ -1.2
RPAP1Q9BWH6 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AL353763.1-201ENST00000624467 1628 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC116036.1-201ENST00000412199 367 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 PPIAP7-201ENST00000454070 489 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC011411.1-201ENST00000509592 876 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AP000620.1-201ENST00000527147 504 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC027369.2-201ENST00000528030 440 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC009120.3-201ENST00000563335 499 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC007346.1-201ENST00000569208 867 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC027243.2-201ENST00000602530 724 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AP003789.1-201ENST00000617737 605 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 MIR7159-201ENST00000620587 66 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AC022726.2-201ENST00000634673 547 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 AL354854.1-201ENST00000455940 1363 ntBASIC7.58□□□□□ -1.2
RPAP1Q9BWH6 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms