Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL359092.1-201ENST00000417156 265 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AL929472.1-201ENST00000417484 429 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 GAPDHP33-201ENST00000443168 1013 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AL117692.1-201ENST00000494283 713 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AC106822.1-201ENST00000502647 526 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 RN7SKP183-201ENST00000517169 324 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AC026956.1-201ENST00000558741 396 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 WBP1LP11-201ENST00000586141 328 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AL356986.1-201ENST00000604085 341 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AC009779.8-202ENST00000607990 932 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AL035425.4-201ENST00000624509 1063 ntBASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4CQ96CF2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CHMP4CQ96CF2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC217777.1-201ENST00000570034 1471 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AL607077.1-201ENST00000401718 499 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 MTCO1P57-201ENST00000432182 261 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC104339.1-201ENST00000465478 348 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 RN7SL413P-201ENST00000482700 297 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 OR52H2P-201ENST00000514607 902 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC037479.1-201ENST00000558361 625 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 MIR3157-201ENST00000578688 85 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 RPL7AP69-201ENST00000595306 806 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC091133.5-201ENST00000603088 301 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC008833.1-201ENST00000611633 691 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 uc_338.29-201ENST00000615099 168 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 TCL6_3.1-201ENST00000619064 137 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC022905.1-201ENST00000503430 3048 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 AC093297.3-201ENST00000607056 2517 ntBASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4CQ96CF2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 FUNDC2P3-201ENST00000334716 533 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 RN7SKP129-201ENST00000410288 299 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 AL139184.1-202ENST00000422303 222 ntBASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4CQ96CF2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms