Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC090115.2-201ENST00000548060 883 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 MTND2P13-201ENST00000577438 1039 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC245052.7-201ENST00000601161 359 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC091133.5-201ENST00000603088 301 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC138473.1-201ENST00000605717 526 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL451049.1-201ENST00000608672 497 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL136097.3-201ENST00000611097 505 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL590410.1-201ENST00000617925 333 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AL132640.3-201ENST00000630473 177 ntBASIC5.83□□□□□ -1.48
PTP4A1Q93096 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTP4A1Q93096 AC074141.1-201ENST00000588129 2995 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTP4A1Q93096 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTP4A1Q93096 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC092070.2-203ENST00000598377 3644 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC092701.1-201ENST00000623627 1551 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTP4A1Q93096 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 RNA5SP321-201ENST00000362722 111 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AL079341.1-201ENST00000404701 1207 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 MEAF6P1-201ENST00000416092 327 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC000089.1-201ENST00000424559 801 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AL392003.1-201ENST00000434394 243 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC009244.1-201ENST00000450566 258 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 RN7SL37P-201ENST00000490461 307 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC096661.1-201ENST00000515870 822 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 RNU6-319P-201ENST00000516025 108 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC010287.1-201ENST00000566916 357 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTP4A1Q93096 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC100832.2-201ENST00000582080 776 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 DIMT1P1-201ENST00000603970 763 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC024589.2-201ENST00000605642 1294 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC117490.2-201ENST00000610042 594 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 MRPL57P1-201ENST00000621486 265 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC005858.3-201ENST00000624756 589 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC024651.2-201ENST00000562480 2098 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC126474.2-201ENST00000623268 1750 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC068870.3-201ENST00000625077 2536 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTP4A1Q93096 AC010329.1-201ENST00000593903 8328 ntBASIC5.82□□□□□ -1.48
PTP4A1Q93096 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.82□□□□□ -1.48
PTP4A1Q93096 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC005725.1-201ENST00000577346 2607 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 MTCO1P15-201ENST00000529569 1526 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms