Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AL359091.1-201ENST00000449048 1734 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 LINC01808-203ENST00000641932 1643 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 AL121768.1-201ENST00000613917 2544 ntBASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC71LQ8N9Z2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL031595.2-201ENST00000624215 19071 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 HCFC2P1-201ENST00000392864 1592 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 RNA5SP152-201ENST00000365184 110 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 RN7SKP1-201ENST00000365525 307 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 MIR187-201ENST00000385062 109 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL445238.1-204ENST00000400311 463 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 RN7SKP30-201ENST00000411373 334 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 MRPS21P2-201ENST00000424704 264 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AHCYP8-201ENST00000425108 209 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL731534.1-201ENST00000434711 269 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 RANP2-201ENST00000456833 229 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 RN7SL776P-201ENST00000493390 268 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC138409.2-202ENST00000507274 458 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC093878.1-201ENST00000515630 432 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 OR6M2P-201ENST00000529831 871 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AP006587.6-201ENST00000582128 1091 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC000095.2-202ENST00000637415 154 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 AC025470.1-201ENST00000510053 2032 ntBASIC5.18□□□□□ -1.58
CCDC71LQ8N9Z2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 AL590635.1-201ENST00000406314 586 ntBASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 AL596268.1-201ENST00000427910 1048 ntBASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 ATP5LP4-201ENST00000434169 307 ntBASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC71LQ8N9Z2 AC016908.1-201ENST00000442571 1219 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms