Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 DOCK11P1-201ENST00000553480 5932 ntBASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NUP54Q7Z3B4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
NUP54Q7Z3B4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
NUP54Q7Z3B4 AC005332.9-201ENST00000620266 2921 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC005225.5-201ENST00000623547 2225 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 RNA5SP85-201ENST00000365378 119 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC245036.1-201ENST00000391727 309 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC240504.1-201ENST00000395709 845 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AL023284.3-201ENST00000407767 334 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 RPS20P25-201ENST00000412447 352 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 RPL36P18-201ENST00000419316 318 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC003989.1-201ENST00000434569 565 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AL020997.1-201ENST00000446554 349 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 KF459542.1-201ENST00000450908 553 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 RPL3P13-201ENST00000550415 216 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 MIR3157-201ENST00000578688 85 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AP002884.5-201ENST00000595053 1132 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AL589743.6-201ENST00000611025 117 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 HTR1DP1-201ENST00000616500 888 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 MIR6085-201ENST00000618314 110 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC110373.1-201ENST00000505994 3505 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC023245.2-201ENST00000530760 2978 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 AC005034.3-201ENST00000604845 1747 ntBASIC6.02□□□□□ -1.45
NUP54Q7Z3B4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AL391419.1-201ENST00000398901 1275 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 GPN3P1-201ENST00000423883 535 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 OR6R1P-201ENST00000431838 940 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AL451136.1-201ENST00000435399 325 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 RAB9AP5-201ENST00000437794 597 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 RAB9AP2-201ENST00000443911 597 ntBASIC6.01□□□□□ -1.45
NUP54Q7Z3B4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms