Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.88□□□□□ -1.31
TPM4P67936 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.88□□□□□ -1.31
TPM4P67936 AC005332.4-201ENST00000592752 579 ntBASIC6.88□□□□□ -1.31
TPM4P67936 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM4P67936 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.88□□□□□ -1.31
TPM4P67936 SNORA74.4-201ENST00000607595 199 ntBASIC6.88□□□□□ -1.31
TPM4P67936 AL137000.1-201ENST00000610528 1244 ntBASIC6.88□□□□□ -1.31
TPM4P67936 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.88□□□□□ -1.31
TPM4P67936 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM4P67936 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
TPM4P67936 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.88□□□□□ -1.31
TPM4P67936 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
TPM4P67936 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 AC092451.3-201ENST00000625067 1343 ntBASIC6.87□□□□□ -1.31
TPM4P67936 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TPM4P67936 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 MIR133A2-201ENST00000347538 102 ntBASIC6.87□□□□□ -1.31
TPM4P67936 SNORA43.1-201ENST00000364863 140 ntBASIC6.87□□□□□ -1.31
TPM4P67936 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 MTND1P10-201ENST00000426108 832 ntBASIC6.87□□□□□ -1.31
TPM4P67936 AC083862.1-201ENST00000427378 1242 ntBASIC6.87□□□□□ -1.31
TPM4P67936 NPM1P25-201ENST00000429734 854 ntBASIC6.87□□□□□ -1.31
TPM4P67936 AC073410.1-201ENST00000435125 589 ntBASIC6.87□□□□□ -1.31
TPM4P67936 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 AL162739.1-201ENST00000450606 307 ntBASIC6.87□□□□□ -1.31
TPM4P67936 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 OSTCP1-201ENST00000455507 450 ntBASIC6.87□□□□□ -1.31
TPM4P67936 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 TRBV5-2-201ENST00000489095 273 ntBASIC6.87□□□□□ -1.31
TPM4P67936 AC093870.1-201ENST00000506837 213 ntBASIC6.87□□□□□ -1.31
TPM4P67936 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 RNA5SP439-201ENST00000617595 124 ntBASIC6.87□□□□□ -1.31
TPM4P67936 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM4P67936 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM4P67936 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM4P67936 AL355488.2-201ENST00000609909 2850 ntBASIC6.87□□□□□ -1.31
TPM4P67936 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.86□□□□□ -1.31
TPM4P67936 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.86□□□□□ -1.31
TPM4P67936 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TPM4P67936 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM4P67936 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.86□□□□□ -1.31
TPM4P67936 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.86□□□□□ -1.31
TPM4P67936 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.86□□□□□ -1.31
TPM4P67936 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM4P67936 KRT8P51-201ENST00000438938 274 ntBASIC6.86□□□□□ -1.31
TPM4P67936 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM4P67936 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM4P67936 RPL23AP60-201ENST00000450011 454 ntBASIC6.86□□□□□ -1.31
TPM4P67936 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 RN7SL643P-201ENST00000471845 291 ntBASIC6.86□□□□□ -1.31
TPM4P67936 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM4P67936 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.86□□□□□ -1.31
TPM4P67936 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.86□□□□□ -1.31
TPM4P67936 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM4P67936 AC092865.1-201ENST00000544395 1023 ntBASIC6.86□□□□□ -1.31
TPM4P67936 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM4P67936 FCGR1CP-201ENST00000579737 1127 ntBASIC6.86□□□□□ -1.31
TPM4P67936 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM4P67936 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM4P67936 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM4P67936 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 AL161912.4-201ENST00000623889 2468 ntBASIC6.86□□□□□ -1.31
TPM4P67936 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.86□□□□□ -1.31
TPM4P67936 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM4P67936 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TPM4P67936 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.85□□□□□ -1.31
TPM4P67936 QRSL1P3-201ENST00000552666 1316 ntBASIC6.85□□□□□ -1.31
TPM4P67936 GVINP1-202ENST00000531871 7271 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms