Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RN7SKP161-201ENST00000411110 305 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 OR3D1P-201ENST00000438288 955 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AMYP1-201ENST00000440059 1023 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AL022237.1-201ENST00000446663 358 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 CT45A11P-201ENST00000448043 1134 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AC103563.5-201ENST00000455643 364 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AP002884.1-201ENST00000479691 655 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 RNA5SP400-201ENST00000517155 111 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.12□□□□□ -1.11
RIPK4P57078 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.12□□□□□ -1.11
RIPK4P57078 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC8.12□□□□□ -1.11
RIPK4P57078 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.12□□□□□ -1.11
RIPK4P57078 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC8.12□□□□□ -1.11
RIPK4P57078 AC073333.2-201ENST00000603589 769 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AC008555.7-201ENST00000605008 583 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AC092681.3-201ENST00000609463 678 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 AL512652.1-201ENST00000619006 500 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.12□□□□□ -1.11
RIPK4P57078 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.12□□□□□ -1.11
RIPK4P57078 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RIPK4P57078 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.12□□□□□ -1.11
RIPK4P57078 OLMALINC-203ENST00000641087 3779 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 AC024587.1-201ENST00000505925 2157 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
RIPK4P57078 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 DOCK11P1-201ENST00000553480 5932 ntBASIC8.12□□□□□ -1.11
RIPK4P57078 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RIPK4P57078 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.12□□□□□ -1.11
RIPK4P57078 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RIPK4P57078 AC119674.1-213ENST00000641177 1386 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RIPK4P57078 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
RIPK4P57078 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.11□□□□□ -1.11
RIPK4P57078 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.11□□□□□ -1.11
RIPK4P57078 SNORA51.9-201ENST00000384295 124 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
RIPK4P57078 AC110602.1-201ENST00000437414 318 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AL353662.1-201ENST00000439099 327 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 OR13K1P-201ENST00000444577 975 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AC097463.1-201ENST00000447288 481 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.11□□□□□ -1.11
RIPK4P57078 CR383658.1-201ENST00000514609 734 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AC090115.2-201ENST00000548060 883 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.11□□□□□ -1.11
RIPK4P57078 AC002310.3-201ENST00000569728 723 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC8.11□□□□□ -1.11
RIPK4P57078 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.11□□□□□ -1.11
RIPK4P57078 AL021368.3-201ENST00000607119 578 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AP001437.1-201ENST00000608783 456 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.11□□□□□ -1.11
RIPK4P57078 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.11□□□□□ -1.11
RIPK4P57078 AL137067.2-201ENST00000621202 131 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RIPK4P57078 AL662795.2-201ENST00000624252 3706 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RIPK4P57078 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RIPK4P57078 AL117339.4-201ENST00000608335 7063 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.11□□□□□ -1.11
RIPK4P57078 AC092724.1-201ENST00000624623 3397 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 AC096921.2-201ENST00000561507 1916 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.11□□□□□ -1.11
RIPK4P57078 AOX3P-204ENST00000491025 2107 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RIPK4P57078 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RIPK4P57078 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RIPK4P57078 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RIPK4P57078 HSPD1P9-201ENST00000420325 1636 ntBASIC8.11□□□□□ -1.11
RIPK4P57078 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RIPK4P57078 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RIPK4P57078 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RIPK4P57078 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RIPK4P57078 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RIPK4P57078 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 OR56A4-201ENST00000330728 1209 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC8.1□□□□□ -1.11
RIPK4P57078 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.1□□□□□ -1.11
RIPK4P57078 AC002553.3-201ENST00000453002 341 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.1□□□□□ -1.11
RIPK4P57078 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.1□□□□□ -1.11
RIPK4P57078 RN7SL165P-201ENST00000477476 291 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.1□□□□□ -1.11
RIPK4P57078 RBBP4P1-201ENST00000502424 1276 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.1□□□□□ -1.11
RIPK4P57078 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.1□□□□□ -1.11
RIPK4P57078 AC092332.1-201ENST00000563684 829 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 RNU4ATAC-201ENST00000580972 127 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC8.1□□□□□ -1.11
RIPK4P57078 AC068768.2-201ENST00000602352 343 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 MIR6071-201ENST00000616741 78 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 FAM27E2-201ENST00000619668 403 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms