Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.9□□□□□ -1.3
COPB1P53618 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.9□□□□□ -1.3
COPB1P53618 AC027334.1-201ENST00000603257 310 ntBASIC6.9□□□□□ -1.3
COPB1P53618 AC005972.3-201ENST00000606304 481 ntBASIC6.9□□□□□ -1.3
COPB1P53618 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.9□□□□□ -1.3
COPB1P53618 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.9□□□□□ -1.3
COPB1P53618 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.9□□□□□ -1.3
COPB1P53618 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.9□□□□□ -1.3
COPB1P53618 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COPB1P53618 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COPB1P53618 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.9□□□□□ -1.31
COPB1P53618 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
COPB1P53618 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.9□□□□□ -1.31
COPB1P53618 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.9□□□□□ -1.31
COPB1P53618 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COPB1P53618 AL121768.1-201ENST00000613917 2544 ntBASIC6.9□□□□□ -1.31
COPB1P53618 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COPB1P53618 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.31
COPB1P53618 ZNF101P1-201ENST00000435701 1720 ntBASIC6.9□□□□□ -1.31
COPB1P53618 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COPB1P53618 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
COPB1P53618 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
COPB1P53618 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.89□□□□□ -1.31
COPB1P53618 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
COPB1P53618 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COPB1P53618 RNU1-5P-201ENST00000362684 144 ntBASIC6.89□□□□□ -1.31
COPB1P53618 RNU1-84P-201ENST00000365447 164 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AC026310.1-201ENST00000396004 378 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AL121835.1-201ENST00000404250 354 ntBASIC6.89□□□□□ -1.31
COPB1P53618 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.89□□□□□ -1.31
COPB1P53618 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.89□□□□□ -1.31
COPB1P53618 RN7SKP151-201ENST00000410230 316 ntBASIC6.89□□□□□ -1.31
COPB1P53618 RPS26P38-201ENST00000414476 348 ntBASIC6.89□□□□□ -1.31
COPB1P53618 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AC015977.1-201ENST00000418887 292 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AL589794.1-201ENST00000424971 390 ntBASIC6.89□□□□□ -1.31
COPB1P53618 HMGB1P32-201ENST00000425971 565 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.89□□□□□ -1.31
COPB1P53618 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.89□□□□□ -1.31
COPB1P53618 AL445687.2-201ENST00000458156 728 ntBASIC6.89□□□□□ -1.31
COPB1P53618 RN7SL655P-201ENST00000486087 298 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AL035690.1-201ENST00000490892 383 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AC008945.1-201ENST00000505144 499 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.89□□□□□ -1.31
COPB1P53618 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.89□□□□□ -1.31
COPB1P53618 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.89□□□□□ -1.31
COPB1P53618 AC245128.3-201ENST00000594721 748 ntBASIC6.89□□□□□ -1.31
COPB1P53618 RPL21P136-201ENST00000605378 396 ntBASIC6.89□□□□□ -1.31
COPB1P53618 BNIP3P7-201ENST00000605641 516 ntBASIC6.89□□□□□ -1.31
COPB1P53618 BX322635.1-201ENST00000605804 496 ntBASIC6.89□□□□□ -1.31
COPB1P53618 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.89□□□□□ -1.31
COPB1P53618 HTR1DP1-201ENST00000616500 888 ntBASIC6.89□□□□□ -1.31
COPB1P53618 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.89□□□□□ -1.31
COPB1P53618 AP003486.1-201ENST00000525716 3994 ntBASIC6.89□□□□□ -1.31
COPB1P53618 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
COPB1P53618 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
COPB1P53618 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.89□□□□□ -1.31
COPB1P53618 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COPB1P53618 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.88□□□□□ -1.31
COPB1P53618 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.88□□□□□ -1.31
COPB1P53618 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COPB1P53618 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.88□□□□□ -1.31
COPB1P53618 CCNT2P1-201ENST00000423082 1315 ntBASIC6.88□□□□□ -1.31
COPB1P53618 AC010894.1-201ENST00000313760 361 ntBASIC6.88□□□□□ -1.31
COPB1P53618 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 AC099535.1-201ENST00000408928 371 ntBASIC6.88□□□□□ -1.31
COPB1P53618 RNU2-18P-201ENST00000411224 162 ntBASIC6.88□□□□□ -1.31
COPB1P53618 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.88□□□□□ -1.31
COPB1P53618 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 BX679664.2-201ENST00000439282 283 ntBASIC6.88□□□□□ -1.31
COPB1P53618 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 RPL7L1P3-201ENST00000455249 689 ntBASIC6.88□□□□□ -1.31
COPB1P53618 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.88□□□□□ -1.31
COPB1P53618 RN7SL350P-201ENST00000492591 299 ntBASIC6.88□□□□□ -1.31
COPB1P53618 MRPL57P6-201ENST00000506570 309 ntBASIC6.88□□□□□ -1.31
COPB1P53618 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.88□□□□□ -1.31
COPB1P53618 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.88□□□□□ -1.31
COPB1P53618 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.88□□□□□ -1.31
COPB1P53618 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.88□□□□□ -1.31
COPB1P53618 AC067805.1-201ENST00000559344 470 ntBASIC6.88□□□□□ -1.31
COPB1P53618 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.88□□□□□ -1.31
COPB1P53618 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COPB1P53618 OR4C49P-201ENST00000563891 900 ntBASIC6.88□□□□□ -1.31
COPB1P53618 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.88□□□□□ -1.31
COPB1P53618 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.88□□□□□ -1.31
COPB1P53618 AC005332.4-201ENST00000592752 579 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms