Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CUBNP3-201ENST00000457461 1784 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HOXA9P31269 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
HOXA9P31269 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXA9P31269 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXA9P31269 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 AC024651.2-201ENST00000562480 2098 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 AC245096.1-201ENST00000413104 546 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXA9P31269 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXA9P31269 MGAT2P1-201ENST00000449718 797 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 RPL5P12-201ENST00000477071 851 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 AC092865.4-201ENST00000477936 615 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 SNORA81.2-201ENST00000516868 170 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXA9P31269 AC084337.1-201ENST00000524809 686 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXA9P31269 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXA9P31269 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXA9P31269 RFPL4AP6-201ENST00000616792 846 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXA9P31269 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXA9P31269 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
HOXA9P31269 AC009120.2-204ENST00000621548 2032 ntBASIC6.55□□□□□ -1.36
HOXA9P31269 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXA9P31269 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXA9P31269 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HOXA9P31269 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXA9P31269 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXA9P31269 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
HOXA9P31269 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HOXA9P31269 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 AC027279.1-201ENST00000568885 4284 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 RNA5SP273-201ENST00000362484 113 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 RNA5SP156-201ENST00000410250 110 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 RPL31P15-201ENST00000449770 338 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 VN1R38P-201ENST00000450265 887 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 PSMA2P2-201ENST00000504319 686 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXA9P31269 SNORD46.2-201ENST00000516021 102 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 AC027667.1-201ENST00000545814 304 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXA9P31269 AC009120.3-201ENST00000563335 499 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 MIR5095-201ENST00000578844 88 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 AC108673.3-201ENST00000609183 335 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 AC127024.6-201ENST00000621598 424 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXA9P31269 RBMY1HP-201ENST00000382759 1389 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
HOXA9P31269 MAPK10-270ENST00000641102 3538 ntBASIC6.54□□□□□ -1.36
HOXA9P31269 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
HOXA9P31269 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXA9P31269 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXA9P31269 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms