Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFRAP16234 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFRAP16234 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AC107977.1-201ENST00000355745 939 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 MIR433-201ENST00000384837 93 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.6□□□□□ -1.35
PDGFRAP16234 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFRAP16234 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFRAP16234 OSTCP4-201ENST00000424397 449 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 TIMM8BP2-201ENST00000445940 251 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 OR7E22P-201ENST00000478335 1035 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFRAP16234 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFRAP16234 SNORA74.1-201ENST00000516320 180 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AC022616.2-201ENST00000523185 300 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.6□□□□□ -1.35
PDGFRAP16234 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFRAP16234 RN7SL230P-201ENST00000580835 303 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AL359091.2-201ENST00000609303 556 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PDGFRAP16234 AC093829.1-201ENST00000506662 1618 ntBASIC6.6□□□□□ -1.35
PDGFRAP16234 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFRAP16234 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDGFRAP16234 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.6□□□□□ -1.35
PDGFRAP16234 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFRAP16234 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.59□□□□□ -1.35
PDGFRAP16234 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFRAP16234 CASC19-246ENST00000641625 1606 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 TRAV35-201ENST00000390462 330 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PDGFRAP16234 SNORA81-201ENST00000408493 178 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 RN7SKP86-201ENST00000410454 332 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 AL354893.1-201ENST00000433735 348 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AL022237.1-201ENST00000446663 358 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 MORF4-201ENST00000447135 971 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AC103563.5-201ENST00000455643 364 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 RN7SL221P-201ENST00000466190 281 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 RPL12P31-201ENST00000478433 450 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AC113367.2-201ENST00000505749 160 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFRAP16234 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AC023389.2-201ENST00000580031 955 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.59□□□□□ -1.35
PDGFRAP16234 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFRAP16234 AL137246.2-201ENST00000613439 662 ntBASIC6.59□□□□□ -1.35
PDGFRAP16234 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDGFRAP16234 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.59□□□□□ -1.35
PDGFRAP16234 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
PDGFRAP16234 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PDGFRAP16234 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.36
PDGFRAP16234 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.59□□□□□ -1.36
PDGFRAP16234 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PDGFRAP16234 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFRAP16234 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFRAP16234 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFRAP16234 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PDGFRAP16234 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 NCOA4P2-201ENST00000340589 1813 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms