Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 NPM1P31-201ENST00000399021 764 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 RN7SKP137-201ENST00000411074 307 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.18□□□□□ -1.42
SHOX2O60902 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.18□□□□□ -1.42
SHOX2O60902 CLIC4P3-201ENST00000422221 752 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.18□□□□□ -1.42
SHOX2O60902 AC016908.1-201ENST00000442571 1219 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 GAPDHP33-201ENST00000443168 1013 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.18□□□□□ -1.42
SHOX2O60902 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.18□□□□□ -1.42
SHOX2O60902 FRG2FP-204ENST00000453982 852 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 AC079193.1-201ENST00000460497 588 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 RPL9P15-201ENST00000491096 532 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.18□□□□□ -1.42
SHOX2O60902 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.18□□□□□ -1.42
SHOX2O60902 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.18□□□□□ -1.42
SHOX2O60902 AC107952.1-201ENST00000524200 376 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SHOX2O60902 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.18□□□□□ -1.42
SHOX2O60902 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.18□□□□□ -1.42
SHOX2O60902 AL132640.1-201ENST00000559594 619 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.18□□□□□ -1.42
SHOX2O60902 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.18□□□□□ -1.42
SHOX2O60902 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.18□□□□□ -1.42
SHOX2O60902 AC061999.1-201ENST00000624454 177 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.18□□□□□ -1.42
SHOX2O60902 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.18□□□□□ -1.42
SHOX2O60902 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.17□□□□□ -1.42
SHOX2O60902 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.17□□□□□ -1.42
SHOX2O60902 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.17□□□□□ -1.42
SHOX2O60902 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.17□□□□□ -1.42
SHOX2O60902 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 AC100810.3-201ENST00000633189 2240 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.17□□□□□ -1.42
SHOX2O60902 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHOX2O60902 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.17□□□□□ -1.42
SHOX2O60902 AL359633.1-201ENST00000421403 310 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.17□□□□□ -1.42
SHOX2O60902 MED28P4-201ENST00000433137 572 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.17□□□□□ -1.42
SHOX2O60902 RPL12P39-201ENST00000455456 496 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.17□□□□□ -1.42
SHOX2O60902 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.17□□□□□ -1.42
SHOX2O60902 RPL19P11-201ENST00000495944 589 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.17□□□□□ -1.42
SHOX2O60902 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.17□□□□□ -1.42
SHOX2O60902 NDUFA3P2-201ENST00000531434 232 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.17□□□□□ -1.42
SHOX2O60902 SLC25A51P2-201ENST00000535708 889 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.17□□□□□ -1.42
SHOX2O60902 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.17□□□□□ -1.42
SHOX2O60902 AL132640.2-202ENST00000559732 614 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AC090826.1-203ENST00000569235 490 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.17□□□□□ -1.42
SHOX2O60902 AC010487.1-201ENST00000594408 1172 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.17□□□□□ -1.42
SHOX2O60902 AC091133.5-201ENST00000603088 301 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AC022001.1-201ENST00000605193 268 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AC023206.1-201ENST00000605824 298 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SHOX2O60902 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 OR9K1P-202ENST00000641111 3217 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 AC003985.2-201ENST00000562268 1669 ntBASIC6.17□□□□□ -1.42
SHOX2O60902 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHOX2O60902 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.16□□□□□ -1.42
SHOX2O60902 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 AC016583.1-201ENST00000624221 2431 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHOX2O60902 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHOX2O60902 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 RNA5SP321-201ENST00000362722 111 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 PDCL3P5-201ENST00000398028 722 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.16□□□□□ -1.42
SHOX2O60902 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms