Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC069499.2-201ENST00000610665 382 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC009704.2-201ENST00000618739 483 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SL301P-202ENST00000618767 298 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC004009.2-201ENST00000623016 728 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL157786.1-207ENST00000627771 695 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 MTCO1P6-201ENST00000481192 1384 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 EEF1A1P13-201ENST00000503537 1389 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AL008638.3-201ENST00000623027 5182 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CTAGE3P-201ENST00000454280 2404 ntBASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.78□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
PCDHGA11Q9Y5H2 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
PCDHGA11Q9Y5H2 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 FO393411.1-201ENST00000325612 420 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 Y_RNA.61-201ENST00000362835 102 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RNU4-12P-201ENST00000365233 139 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 SNORD65.1-201ENST00000390889 71 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RNU6-575P-201ENST00000411326 105 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL7P30-201ENST00000420888 709 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC012498.1-201ENST00000424037 437 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 Z74696.1-201ENST00000428208 1123 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL050321.1-201ENST00000432363 400 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 Z98752.2-201ENST00000432727 312 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 MTND1P28-201ENST00000435623 950 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC098828.1-201ENST00000436164 440 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC097527.1-201ENST00000437031 530 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL512286.1-201ENST00000439244 400 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL29P7-201ENST00000440227 457 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL353093.1-201ENST00000441292 436 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RANP1-206ENST00000455094 651 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 YAP1P2-201ENST00000455104 610 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 KLF3P2-201ENST00000465138 268 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 ACTG1P13-201ENST00000486987 1043 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RPS4XP15-201ENST00000489210 795 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC122714.1-201ENST00000502510 459 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 PSMA2P2-201ENST00000504319 686 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 OR7E85P-201ENST00000512164 985 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC046134.1-201ENST00000514454 666 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 MTND6P20-201ENST00000522986 418 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC083923.1-201ENST00000523708 376 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 SERPINA15P-201ENST00000529287 266 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AP002453.2-201ENST00000533503 320 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL109628.2-201ENST00000554037 201 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 SYPL1P2-201ENST00000582878 727 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL390838.2-201ENST00000602394 274 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AC009686.2-201ENST00000607017 577 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 AL022324.3-201ENST00000609330 747 ntBASIC7.77□□□□□ -1.17
PCDHGA11Q9Y5H2 RBM22P6-201ENST00000611682 867 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms