Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USP35Q9P2H5 RN7SKP206-201ENST00000410823 293 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 AC012497.1-201ENST00000429392 575 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 GTF3AP6-201ENST00000432585 986 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 HMGB1P7-201ENST00000450921 612 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 NUCKS1P1-201ENST00000452067 703 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 RPL7AP23-201ENST00000482625 776 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 RN7SL101P-201ENST00000496350 279 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 OR4A1P-201ENST00000532342 920 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USP35Q9P2H5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 AC008521.2-201ENST00000591021 259 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 MIR6886-201ENST00000619864 61 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 AC005261.2-201ENST00000593427 4258 ntBASIC8.99□□□□□ -0.97
USP35Q9P2H5 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USP35Q9P2H5 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USP35Q9P2H5 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
USP35Q9P2H5 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
USP35Q9P2H5 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
USP35Q9P2H5 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 OR10AB1P-202ENST00000641219 1686 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 RBBP4P4-201ENST00000398588 1289 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 AL356806.1-201ENST00000422524 916 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 UBBP5-201ENST00000446970 266 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 RN7SL254P-201ENST00000460609 284 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 AC005632.2-201ENST00000564271 828 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 AL357140.4-201ENST00000636827 412 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 SNX18P3-202ENST00000565670 1750 ntBASIC8.98□□□□□ -0.97
USP35Q9P2H5 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
USP35Q9P2H5 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
USP35Q9P2H5 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
USP35Q9P2H5 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.97□□□□□ -0.97
USP35Q9P2H5 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.97□□□□□ -0.97
USP35Q9P2H5 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
USP35Q9P2H5 MTCO1P25-201ENST00000414449 1799 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
USP35Q9P2H5 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
USP35Q9P2H5 RN7SKP69-201ENST00000365390 305 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 CBX1P3-201ENST00000413296 527 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 EEF1B2P8-201ENST00000414101 671 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.97□□□□□ -0.97
USP35Q9P2H5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.97□□□□□ -0.97
USP35Q9P2H5 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
USP35Q9P2H5 PMS2P9-201ENST00000441237 515 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 TXNP2-201ENST00000443918 295 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 RPL5P7-201ENST00000444235 813 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
USP35Q9P2H5 RPL26P30-201ENST00000453533 435 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.97□□□□□ -0.97
USP35Q9P2H5 AC022336.1-201ENST00000475510 337 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.97□□□□□ -0.97
USP35Q9P2H5 RN7SL187P-201ENST00000495587 303 ntBASIC8.97□□□□□ -0.97
USP35Q9P2H5 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.97□□□□□ -0.97
USP35Q9P2H5 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms