Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AC126615.1-201ENST00000470084 630 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AL928654.1-201ENST00000476081 354 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AC079080.1-201ENST00000479841 822 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AC078899.1-201ENST00000521432 1185 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 TPRX1P1-201ENST00000557620 319 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AC010503.3-201ENST00000594355 540 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AL139041.1-201ENST00000605480 610 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 SNORD96A-201ENST00000606577 79 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 MRPL57P3-201ENST00000619218 176 ntBASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VIPAS39Q9H9C1 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 PDCL3P5-201ENST00000398028 722 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC093107.1-201ENST00000422772 609 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 VDAC2P3-201ENST00000430995 828 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RPS13P2-201ENST00000437890 455 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RPS10P18-201ENST00000442662 495 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RBMY2AP-201ENST00000445405 1157 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RBMY2CP-201ENST00000448575 1157 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RBMY2DP-202ENST00000448881 1157 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 CCNJP1-201ENST00000450600 1149 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RPL12P39-201ENST00000455456 496 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC007066.2-202ENST00000566531 914 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 MIR4660-201ENST00000583549 74 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 AL133481.2-203ENST00000607558 139 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 SNX18P12-201ENST00000624821 759 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 GTF2IP4-201ENST00000453092 2054 ntBASIC6.26□□□□□ -1.41
VIPAS39Q9H9C1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 AC130304.1-201ENST00000622942 2385 ntBASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 AC092376.2-201ENST00000622621 4116 ntBASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 AP001157.1-201ENST00000550837 2339 ntBASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 PPIAP24-201ENST00000328558 471 ntBASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.25□□□□□ -1.41
VIPAS39Q9H9C1 RPL11P3-201ENST00000395256 523 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms