Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 RNA5SP79-201ENST00000365193 109 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 RPL12P1-201ENST00000374520 498 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC233289.1-201ENST00000403700 508 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 TAS2R2P-201ENST00000421146 910 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 HSPE1P16-201ENST00000426640 348 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ETF1P3-201ENST00000430422 1160 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC093166.3-201ENST00000448785 303 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 CALM1P2-201ENST00000452941 448 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC019084.1-201ENST00000457337 432 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 RPS10P28-201ENST00000480396 498 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC093719.1-201ENST00000480427 441 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 RPL7AP30-201ENST00000482859 796 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 SSU72P6-201ENST00000532644 488 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 OR7E128P-201ENST00000532736 1024 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC092718.4-201ENST00000566639 716 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 NDUFA5P11-201ENST00000567995 343 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 MIR3135A-201ENST00000578460 77 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AL049840.5-201ENST00000602827 552 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 CYCSP1-201ENST00000604815 315 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 FRG2MP-201ENST00000613317 856 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC021755.4-201ENST00000616620 456 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC005393.1-201ENST00000617916 584 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AL121985.3-201ENST00000620690 523 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC063952.1-203ENST00000634410 658 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 FGL2-202ENST00000637771 989 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC139713.2-210ENST00000641741 992 ntBASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM55Q9BYV6 AC012078.1-201ENST00000405035 1646 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 NXF4-202ENST00000416098 1465 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 RNY3P9-201ENST00000384727 106 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 MIR513B-201ENST00000385136 84 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 RNU6-932P-201ENST00000391108 106 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 RN7SKP30-201ENST00000411373 334 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 RPL22P18-201ENST00000417197 377 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 GTF2IP3-201ENST00000433887 494 ntBASIC7.19□□□□□ -1.26
TRIM55Q9BYV6 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms