Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 PPIAP24-201ENST00000328558 471 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 MRPS6P2-201ENST00000381143 370 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AL359092.1-201ENST00000417156 265 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC128677.1-201ENST00000436016 442 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 COL11A2P1-205ENST00000441798 676 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC009237.1-201ENST00000442127 744 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 HMGN1P5-201ENST00000448591 263 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 RN7SL413P-201ENST00000482700 297 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC034205.1-201ENST00000520621 638 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AL162632.2-201ENST00000553933 399 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 PPIAP14-201ENST00000577627 496 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC011921.2-201ENST00000589465 152 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC245052.7-201ENST00000601161 359 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AL358072.1-201ENST00000604156 575 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 PPATP2-201ENST00000605635 508 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC015802.5-201ENST00000607478 399 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 OR1N1-202ENST00000619659 939 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC098679.4-201ENST00000624241 654 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 RPL31P11-201ENST00000426558 1558 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 ASNSP6-201ENST00000592770 1618 ntBASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP1Q96SZ6 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC078880.4-201ENST00000617627 1749 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 GPN3P1-201ENST00000423883 535 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 MTND5P25-201ENST00000430499 799 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC092106.2-201ENST00000436597 487 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 GAPDHP33-201ENST00000443168 1013 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 RPS15AP29-201ENST00000445539 400 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC099670.1-201ENST00000455141 783 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 SULT1D1P-201ENST00000458020 882 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 RN7SL836P-201ENST00000476140 296 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC005412.2-201ENST00000492004 341 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 EIF4E2P2-201ENST00000492033 736 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 RPL5P11-201ENST00000498068 893 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC093870.1-201ENST00000506837 213 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 RN7SKP287-201ENST00000516546 266 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 BTG1P1-201ENST00000540396 508 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC037479.1-201ENST00000558361 625 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 SYPL1P2-201ENST00000582878 727 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms