Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 MTND1P36-201ENST00000522384 936 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC025857.1-201ENST00000525252 377 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 RPL29P33-201ENST00000587474 316 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 ADAD1P2-201ENST00000588476 646 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 OR7E19P-202ENST00000589942 844 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AL512430.4-201ENST00000603085 613 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC099777.1-201ENST00000603779 1070 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AP005131.7-201ENST00000610087 611 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC016590.3-201ENST00000611171 753 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC024255.1-201ENST00000614376 102 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC007671.1-201ENST00000616957 830 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AL132640.3-201ENST00000630473 177 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AL163152.1-201ENST00000642001 374 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 RBPJP6-201ENST00000411556 1431 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 AC137056.2-201ENST00000624055 1958 ntBASIC5.97□□□□□ -1.45
CLIP4Q8N3C7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.96□□□□□ -1.45
CLIP4Q8N3C7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CLIP4Q8N3C7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
CLIP4Q8N3C7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CLIP4Q8N3C7 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.45
CLIP4Q8N3C7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
CLIP4Q8N3C7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 RNU11-201ENST00000387069 134 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC116036.1-201ENST00000412199 367 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 RANP6-201ENST00000413691 644 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC013410.2-201ENST00000422627 201 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC003989.1-201ENST00000434569 565 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 CCNJP1-201ENST00000450600 1149 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC022080.2-201ENST00000452932 533 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AP005639.1-201ENST00000526939 192 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AP004607.5-201ENST00000532034 217 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 RN7SL32P-201ENST00000580514 281 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 RN7SL657P-201ENST00000582431 293 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AL360012.1-201ENST00000602813 131 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC024933.1-201ENST00000608472 348 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 MIR6849-201ENST00000618543 69 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC027506.1-201ENST00000621395 198 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 AC110373.1-201ENST00000505994 3505 ntBASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP4Q8N3C7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms