Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 CR788268.1-201ENST00000603931 1809 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AC011379.1-201ENST00000508713 3025 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 RANP7-201ENST00000418085 644 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 BX510359.3-201ENST00000422168 306 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 PPIAP10-201ENST00000438675 458 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 RN7SL629P-201ENST00000489622 285 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AC021269.1-201ENST00000526860 705 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AP003168.1-201ENST00000530091 307 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AC009237.12-201ENST00000604755 742 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AC108673.3-201ENST00000609183 335 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 AC022325.1-201ENST00000502748 2199 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.81□□□□□ -1.16
SYNE4Q8N205 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SYNE4Q8N205 LINC02035-201ENST00000610128 5476 ntBASIC7.81□□□□□ -1.16
SYNE4Q8N205 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC053481.2-202ENST00000582394 1500 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 AL591848.4-201ENST00000567832 3472 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC130360.1-201ENST00000425489 1117 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 EIF2S2P5-201ENST00000457635 968 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC011476.1-201ENST00000466725 307 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC130365.2-201ENST00000525882 1201 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 AC008536.1-201ENST00000602872 669 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 MIR6826-201ENST00000617808 98 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 AP003119.3-201ENST00000566747 4192 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 RBMY1HP-201ENST00000382759 1389 ntBASIC7.8□□□□□ -1.16
SYNE4Q8N205 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SYNE4Q8N205 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SYNE4Q8N205 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.79□□□□□ -1.16
SYNE4Q8N205 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SYNE4Q8N205 OR52B3P-201ENST00000314715 928 ntBASIC7.79□□□□□ -1.16
SYNE4Q8N205 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms