Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 RN7SKP237-201ENST00000364663 301 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 RNA5SP251-201ENST00000410614 137 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC007562.1-201ENST00000421819 517 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC023274.2-201ENST00000445264 521 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 MTND2P3-201ENST00000452458 470 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 RPS4XP17-201ENST00000479057 754 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC037479.1-201ENST00000558361 625 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC026898.1-201ENST00000586404 571 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 MIR7159-201ENST00000620587 66 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AC018659.2-201ENST00000624690 715 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AL355377.1-201ENST00000621125 1653 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 AL662795.2-201ENST00000624252 3706 ntBASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZNF549Q6P9A3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 HDAC1P2-201ENST00000453661 1398 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AL133243.2-201ENST00000610331 1621 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AL157702.1-201ENST00000398764 426 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 RPS17P17-201ENST00000419392 409 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC092601.1-201ENST00000444526 383 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 RN7SL369P-201ENST00000477138 299 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 RPL12P31-201ENST00000478433 450 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 RN7SKP248-201ENST00000516278 305 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 RNA5SP206-201ENST00000516703 121 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC135983.3-201ENST00000528049 1226 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 MIR212-201ENST00000586026 110 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 NPIPB1P-202ENST00000588786 828 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC063977.7-201ENST00000594454 337 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC008147.4-201ENST00000617570 1204 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC005899.6-201ENST00000620729 297 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 AC096921.2-201ENST00000561507 1916 ntBASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZNF549Q6P9A3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ZNF549Q6P9A3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms