Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.28□□□□□ -1.72
RPL39P62891 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RPL39P62891 AC005005.4-201ENST00000623789 16698 ntBASIC4.28□□□□□ -1.72
RPL39P62891 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.28□□□□□ -1.72
RPL39P62891 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
RPL39P62891 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
RPL39P62891 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RPL39P62891 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.27□□□□□ -1.73
RPL39P62891 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 AC114774.1-201ENST00000507410 1770 ntBASIC4.27□□□□□ -1.73
RPL39P62891 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 AC011933.2-201ENST00000578539 2790 ntBASIC4.27□□□□□ -1.73
RPL39P62891 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.27□□□□□ -1.73
RPL39P62891 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.27□□□□□ -1.73
RPL39P62891 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPL39P62891 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.27□□□□□ -1.73
RPL39P62891 RNA5SP375-201ENST00000362975 119 ntBASIC4.27□□□□□ -1.73
RPL39P62891 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPL39P62891 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPL39P62891 RN7SKP221-201ENST00000410420 301 ntBASIC4.27□□□□□ -1.73
RPL39P62891 AC024937.2-201ENST00000411669 1242 ntBASIC4.27□□□□□ -1.73
RPL39P62891 MICG-208ENST00000416822 132 ntBASIC4.27□□□□□ -1.73
RPL39P62891 FECHP1-201ENST00000431896 1214 ntBASIC4.27□□□□□ -1.73
RPL39P62891 CUBNP2-201ENST00000443534 1139 ntBASIC4.27□□□□□ -1.73
RPL39P62891 RPS3AP49-201ENST00000472161 790 ntBASIC4.27□□□□□ -1.73
RPL39P62891 RN7SL369P-201ENST00000477138 299 ntBASIC4.27□□□□□ -1.73
RPL39P62891 AF305872.1-201ENST00000485217 471 ntBASIC4.27□□□□□ -1.73
RPL39P62891 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.27□□□□□ -1.73
RPL39P62891 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 RPL7L1P7-201ENST00000509986 724 ntBASIC4.27□□□□□ -1.73
RPL39P62891 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 AC097486.1-201ENST00000515331 210 ntBASIC4.27□□□□□ -1.73
RPL39P62891 RN7SKP242-201ENST00000515967 289 ntBASIC4.27□□□□□ -1.73
RPL39P62891 SCARNA11.1-201ENST00000516918 132 ntBASIC4.27□□□□□ -1.73
RPL39P62891 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.27□□□□□ -1.73
RPL39P62891 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.27□□□□□ -1.73
RPL39P62891 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.27□□□□□ -1.73
RPL39P62891 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.27□□□□□ -1.73
RPL39P62891 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.27□□□□□ -1.73
RPL39P62891 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.27□□□□□ -1.73
RPL39P62891 RPL29P33-201ENST00000587474 316 ntBASIC4.27□□□□□ -1.73
RPL39P62891 AC060780.2-201ENST00000589047 198 ntBASIC4.27□□□□□ -1.73
RPL39P62891 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.27□□□□□ -1.73
RPL39P62891 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.27□□□□□ -1.73
RPL39P62891 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.27□□□□□ -1.73
RPL39P62891 AC012175.1-201ENST00000603755 531 ntBASIC4.27□□□□□ -1.73
RPL39P62891 RN7SL261P-201ENST00000613441 282 ntBASIC4.27□□□□□ -1.73
RPL39P62891 AL109924.4-201ENST00000623089 670 ntBASIC4.27□□□□□ -1.73
RPL39P62891 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.27□□□□□ -1.73
RPL39P62891 SAMMSON-214ENST00000641395 1264 ntBASIC4.27□□□□□ -1.73
RPL39P62891 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RPL39P62891 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.27□□□□□ -1.73
RPL39P62891 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPL39P62891 AC018628.1-201ENST00000624147 3819 ntBASIC4.27□□□□□ -1.73
RPL39P62891 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 AC016583.1-201ENST00000624221 2431 ntBASIC4.26□□□□□ -1.73
RPL39P62891 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.26□□□□□ -1.73
RPL39P62891 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.26□□□□□ -1.73
RPL39P62891 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 RN7SKP128-201ENST00000364270 303 ntBASIC4.26□□□□□ -1.73
RPL39P62891 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RPL39P62891 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 PTCD2P2-201ENST00000415579 1095 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.26□□□□□ -1.73
RPL39P62891 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 RPS7P14-201ENST00000426405 583 ntBASIC4.26□□□□□ -1.73
RPL39P62891 VN1R53P-201ENST00000429536 957 ntBASIC4.26□□□□□ -1.73
RPL39P62891 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms