Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH13P55290 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH13P55290 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH13P55290 RN7SL657P-201ENST00000582431 293 ntBASIC6.15□□□□□ -1.42
CDH13P55290 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH13P55290 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH13P55290 AL078624.2-201ENST00000605063 554 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH13P55290 SNORA35B-201ENST00000607417 129 ntBASIC6.15□□□□□ -1.42
CDH13P55290 Z93930.3-201ENST00000607919 749 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AL008582.1-201ENST00000609612 442 ntBASIC6.15□□□□□ -1.42
CDH13P55290 AC096586.2-201ENST00000610260 441 ntBASIC6.15□□□□□ -1.42
CDH13P55290 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH13P55290 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH13P55290 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CDH13P55290 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH13P55290 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH13P55290 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH13P55290 AC125238.2-201ENST00000430003 1440 ntBASIC6.15□□□□□ -1.43
CDH13P55290 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH13P55290 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CDH13P55290 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.15□□□□□ -1.43
CDH13P55290 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.15□□□□□ -1.43
CDH13P55290 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.15□□□□□ -1.43
CDH13P55290 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CDH13P55290 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH13P55290 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 MIR431-201ENST00000385266 114 ntBASIC6.14□□□□□ -1.43
CDH13P55290 RPL7P58-201ENST00000402913 758 ntBASIC6.14□□□□□ -1.43
CDH13P55290 RNA5SP155-201ENST00000411154 129 ntBASIC6.14□□□□□ -1.43
CDH13P55290 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 AP003385.1-201ENST00000426387 893 ntBASIC6.14□□□□□ -1.43
CDH13P55290 GTF2IP14-201ENST00000441415 586 ntBASIC6.14□□□□□ -1.43
CDH13P55290 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 CCNHP1-201ENST00000513311 678 ntBASIC6.14□□□□□ -1.43
CDH13P55290 RNU6-551P-201ENST00000516661 103 ntBASIC6.14□□□□□ -1.43
CDH13P55290 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH13P55290 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH13P55290 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 DPPA3P2-202ENST00000557188 1219 ntBASIC6.14□□□□□ -1.43
CDH13P55290 AC023968.1-201ENST00000560719 475 ntBASIC6.14□□□□□ -1.43
CDH13P55290 SYPL1P2-201ENST00000582878 727 ntBASIC6.14□□□□□ -1.43
CDH13P55290 MIR3159-201ENST00000584572 74 ntBASIC6.14□□□□□ -1.43
CDH13P55290 RPL7AP69-201ENST00000595306 806 ntBASIC6.14□□□□□ -1.43
CDH13P55290 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 AC006924.1-201ENST00000610750 559 ntBASIC6.14□□□□□ -1.43
CDH13P55290 AC007204.1-201ENST00000621794 555 ntBASIC6.14□□□□□ -1.43
CDH13P55290 AC096921.2-201ENST00000561507 1916 ntBASIC6.14□□□□□ -1.43
CDH13P55290 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH13P55290 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH13P55290 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH13P55290 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDH13P55290 AC092692.1-201ENST00000623625 2595 ntBASIC6.13□□□□□ -1.43
CDH13P55290 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH13P55290 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDH13P55290 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH13P55290 RNA5SP514-201ENST00000363717 111 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH13P55290 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDH13P55290 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AL445238.1-204ENST00000400311 463 ntBASIC6.13□□□□□ -1.43
CDH13P55290 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH13P55290 MEAF6P1-201ENST00000416092 327 ntBASIC6.13□□□□□ -1.43
CDH13P55290 AC245884.2-201ENST00000426257 404 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms