Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.8□□□□□ -1.32
RB1P06400 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.8□□□□□ -1.32
RB1P06400 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RB1P06400 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 NCOA4P3-201ENST00000513203 1877 ntBASIC6.79□□□□□ -1.32
RB1P06400 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 AL049634.1-201ENST00000453770 1720 ntBASIC6.79□□□□□ -1.32
RB1P06400 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.79□□□□□ -1.32
RB1P06400 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 AC091305.2-201ENST00000624049 1576 ntBASIC6.79□□□□□ -1.32
RB1P06400 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 RNA5SP346-201ENST00000363541 121 ntBASIC6.79□□□□□ -1.32
RB1P06400 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.79□□□□□ -1.32
RB1P06400 AC023141.3-201ENST00000436698 278 ntBASIC6.79□□□□□ -1.32
RB1P06400 DNAJC19P5-201ENST00000443295 316 ntBASIC6.79□□□□□ -1.32
RB1P06400 HIGD1AP16-201ENST00000450986 258 ntBASIC6.79□□□□□ -1.32
RB1P06400 AC011476.1-201ENST00000466725 307 ntBASIC6.79□□□□□ -1.32
RB1P06400 RPL34P33-201ENST00000486062 334 ntBASIC6.79□□□□□ -1.32
RB1P06400 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 AC095057.1-201ENST00000507583 168 ntBASIC6.79□□□□□ -1.32
RB1P06400 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.79□□□□□ -1.32
RB1P06400 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.79□□□□□ -1.32
RB1P06400 AC092375.1-201ENST00000550410 637 ntBASIC6.79□□□□□ -1.32
RB1P06400 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.79□□□□□ -1.32
RB1P06400 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.79□□□□□ -1.32
RB1P06400 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RB1P06400 AC090236.2-201ENST00000587933 1101 ntBASIC6.79□□□□□ -1.32
RB1P06400 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.79□□□□□ -1.32
RB1P06400 AL354718.1-201ENST00000619764 589 ntBASIC6.79□□□□□ -1.32
RB1P06400 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.79□□□□□ -1.32
RB1P06400 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RB1P06400 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.79□□□□□ -1.32
RB1P06400 CUBNP3-201ENST00000457461 1784 ntBASIC6.79□□□□□ -1.32
RB1P06400 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 AC015871.3-201ENST00000618835 2261 ntBASIC6.79□□□□□ -1.32
RB1P06400 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RB1P06400 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
RB1P06400 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.78□□□□□ -1.32
RB1P06400 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RB1P06400 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.78□□□□□ -1.32
RB1P06400 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.78□□□□□ -1.32
RB1P06400 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RB1P06400 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.78□□□□□ -1.32
RB1P06400 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.78□□□□□ -1.32
RB1P06400 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 CST12P-201ENST00000457644 362 ntBASIC6.78□□□□□ -1.32
RB1P06400 RPL23AP64-201ENST00000469465 435 ntBASIC6.78□□□□□ -1.32
RB1P06400 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.78□□□□□ -1.32
RB1P06400 AC253576.1-201ENST00000511645 1156 ntBASIC6.78□□□□□ -1.32
RB1P06400 AC027308.1-201ENST00000517993 110 ntBASIC6.78□□□□□ -1.32
RB1P06400 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.78□□□□□ -1.32
RB1P06400 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.78□□□□□ -1.32
RB1P06400 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RB1P06400 AC084033.1-201ENST00000550830 633 ntBASIC6.78□□□□□ -1.32
RB1P06400 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.78□□□□□ -1.32
RB1P06400 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.78□□□□□ -1.32
RB1P06400 AC068768.2-201ENST00000602352 343 ntBASIC6.78□□□□□ -1.32
RB1P06400 AC020765.1-201ENST00000604296 328 ntBASIC6.78□□□□□ -1.32
RB1P06400 AL512652.1-201ENST00000619006 500 ntBASIC6.78□□□□□ -1.32
RB1P06400 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RB1P06400 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.78□□□□□ -1.32
RB1P06400 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.78□□□□□ -1.32
RB1P06400 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms