Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC021269.1-201ENST00000526860 705 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC090651.1-201ENST00000567865 634 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 MIR4701-201ENST00000583094 63 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 SMIM12P1-201ENST00000603004 274 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC141002.1-201ENST00000607025 279 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 uc_338.31-201ENST00000615595 186 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 MIR6721-201ENST00000617181 87 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC244100.4-201ENST00000617747 388 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC073488.6-201ENST00000632293 754 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 TMCC1P1-201ENST00000518897 1980 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 EPS15P1-202ENST00000459691 2071 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DQB2P05538 AC090181.3-201ENST00000624777 1514 ntBASIC6.25□□□□□ -1.41
HLA-DQB2P05538 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 PPBPP2-201ENST00000513150 1362 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 RN7SKP151-201ENST00000410230 316 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 RN7SKP86-201ENST00000410454 332 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AL359885.1-201ENST00000415786 903 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AC015977.1-201ENST00000418887 292 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 RPL7AP14-201ENST00000424041 802 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 RPSAP65-201ENST00000429660 595 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AL117692.1-201ENST00000494283 713 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 MRPS21P8-201ENST00000569196 235 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 RN7SL261P-201ENST00000613441 282 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 RFPL4AP6-201ENST00000616792 846 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AL357140.4-201ENST00000636827 412 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AC022325.1-201ENST00000502748 2199 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AC007114.2-201ENST00000576014 4281 ntBASIC6.24□□□□□ -1.41
HLA-DQB2P05538 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DQB2P05538 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 RNA5SP375-201ENST00000362975 119 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 RNA5SP232-201ENST00000364144 119 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 RNA5SP251-201ENST00000410614 137 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 RPL7L1P3-201ENST00000455249 689 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 EIF4E2P2-201ENST00000492033 736 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AP002453.1-201ENST00000492327 668 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AC008945.1-201ENST00000505144 499 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 RN7SL371P-201ENST00000578099 267 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 GLYATL1P2-202ENST00000588046 902 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AL109924.4-201ENST00000623089 670 ntBASIC6.23□□□□□ -1.41
HLA-DQB2P05538 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
HLA-DQB2P05538 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms